| New model in OGS2.0 | DPOGS204568 |
|---|---|
| Genomic Position | scaffold572:- 53754-59800 |
| See gene structure | |
| CDS Length | 1410 |
| Paired RNAseq reads | 372 |
| Single RNAseq reads | 1170 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001544 (3e-38) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (2e-108) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (3e-108) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding GO:0006278 RNA-dependent DNA replication |
| InterPro families | ND |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGGCCGCACTTTTTGCTGATTTCCCGGAAGACGAGAAAAGAGATTCGGTGACTTTTTCA
GTTGCCCATACTATTGTAATGATAAAGATGTTCTCCATTATAGTAAACAAAAAAAACATA
AAAAAATTGATAAGTGATATAATTGCGGTATGTGAGTCACACGAAGAAGAGTCTTTGATG
AATGAAAAATATAAAGTCATGAAAATAAATGTCATCGCTTACTTCTTCACTTGTTATTCT
TCGGCTGCTTGTTTTGTGTTTGAAGGCTTGAGAAAAATGTATGAAGTTGATGGCTTTACT
ATGGTTATTTTGATAATGTTCAAATATAAATTAATAACCCTTAGGAATTACTTCGATAAA
TTAAGGAAAGACACCGAGATACTTCATCAAAGCAGTGACCCTCAATTAGCTGTTAACCAT
CTTGTAAATGGACTTATCAAGGGTATTATTATGCACAAAGAATTATTAAGAATATTAAAA
GAGATAGATAAAGCATTCGGAACTGTGGTGGCCTTGCAACTATGTCAGAGCTCAGGAGGT
GCTGTTTCCCTTTTGCTTGGAATAGCTGCATCCTTACTCTCGGAATCTATCTTCTACTGT
GGTTGGCACACATGCTCCTTGGAAAATTCACGTGGACGGAATATTCGTCGTATCGTATTG
CATGCATGTATTCAGGCACAGCGACCGCTTGTTATGAAAGCCTTTAAAATGATCGAACTC
ACATACGGAACATTCCTCTGGGGGCAGAAGCTCATTTACAAATTGGCACGAGCTCGGGAT
AAGGCGACGCAAGATATCGCAAAATGTCTTAGCGTCAAAGATTCCCAAGGCACGTTGCTG
TGTAATCATGCCTCTGTGAAGGAGAGATGGAGATGCTACTTCAAGGAGTTGCTAAATACT
CAGCACCCGTGCAGTCTTCCAACCGAAATACCTCCTAATCTTGGACTTATTGCCCCGATA
ACACCTGACGAAACTCGGAATTGTCTTCGACGCATGAAGAATCGGAAAGCGGTGGGACCT
GACGATATTCCGATCGAAGCGTGGAAATCATTGGGCTCTCTTGGTGTGCTCATACTGACG
GACCTTTTTAACCGCGTCTTGAACACTGGGACTATGCCACATCAGTGGCGTTATAGTTAC
ATTACCCCTATATACAAAGGCAGGGGCAGTGTTCAAGATTGTGGTAGTTATAGGGGCGTT
AAGATCATGAGTCACACCATGAAGCTCTTTGAGCGTATGATCGACCTCAGGCTCCGCCGA
GAGTGTACTGTCTCGGAATGTCAATATGGATTTCAGCCAGGATCGGGCACCTTGGACGCC
ATCTTTGCCATCAGAACTCTGATGGAGGCATACAGGGAAAAAAAGGAGAGCTCTGCATGT
CGCATTCCTAGATCTGCAGAAGGCCTTTGA
Protein sequence:
MAALFADFPEDEKRDSVTFSVAHTIVMIKMFSIIVNKKNIKKLISDIIAVCESHEEESLM
NEKYKVMKINVIAYFFTCYSSAACFVFEGLRKMYEVDGFTMVILIMFKYKLITLRNYFDK
LRKDTEILHQSSDPQLAVNHLVNGLIKGIIMHKELLRILKEIDKAFGTVVALQLCQSSGG
AVSLLLGIAASLLSESIFYCGWHTCSLENSRGRNIRRIVLHACIQAQRPLVMKAFKMIEL
TYGTFLWGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNT
QHPCSLPTEIPPNLGLIAPITPDETRNCLRRMKNRKAVGPDDIPIEAWKSLGSLGVLILT
DLFNRVLNTGTMPHQWRYSYITPIYKGRGSVQDCGSYRGVKIMSHTMKLFERMIDLRLRR
ECTVSECQYGFQPGSGTLDAIFAIRTLMEAYREKKESSACRIPRSAEGL