| Genomic Position | scaffold572:- 52751-53653 |
|---|---|
| See gene structure | |
| CDS Length | 903 |
| Paired RNAseq reads | 253 |
| Single RNAseq reads | 1194 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007995 (6e-09) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (8e-160) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (7e-149) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10012 |
Nucleotide sequence:
ATGGTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCGATCTCAGTAGGGGTTCACCAA
GGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATC
CAGGACCAGCCTCCATGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGC
AGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTT
AAACTAAATGTGACGAAGACCGAGTACATGGCTTGCGGAAGCCCGGACTCTTGCACTATC
CATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTG
CATGAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAA
TGGCGTGAGGTCACAGGTGTGGTCTGCGACCGCAGAATACCGCCCAAGCTCAAGGGACTA
ATATACAAGAGCATAATCCGACCGGTTCTCTTATATGGAAGCGAATGTTGGCCAACACTG
TCCAGGCACACTCAGGAGCTTCACGTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGC
GTAACGCGGGCTGACCGTATACGTAACACATTTATCCGAGGTAGTCTTGGAGTCCGTGAC
GTAGCGGATAAGCTTCAAGAGAGTCGCCTGAGATGGTATGGCCACGTTGCACGCCGGCCT
GAGAACTACGTCGGAAAAATTTGCCTTGATATGTCGGTCCCTGGAGCAAGACCCCCAGGA
CGCCCAAGAAAGCGATGGCTGGACACCGTGAAGCAGGATATGAGAGCCAATGGACTTACC
ACCGAGGATGCCAAAGACCGTGCAAAGTGGAGGAGTTTGAGCAGCAAGGCAGACCCTGGC
TAA
Protein sequence:
MVRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDES
RLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSIL
HESGGIDHDVQARISAAWAKWREVTGVVCDRRIPPKLKGLIYKSIIRPVLLYGSECWPTL
SRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP
ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTEDAKDRAKWRSLSSKADPG