New model in OGS2.0 | DPOGS208459  |
---|---|
Genomic Position | scaffold415:- 108604-113658 |
See gene structure | |
CDS Length | 4149 |
Paired RNAseq reads   | 250 |
Single RNAseq reads   | 690 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010597 (2e-07) |
Best Drosophila hit   | fat (0.0) |
Best Human hit | protocadherin Fat 4 precursor (0.0) |
Best NR hit (blastp)   | fat protein [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | fat protein [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0005887 integral to plasma membrane GO:0000904 cell morphogenesis involved in differentiation GO:0016339 calcium-dependent cell-cell adhesion GO:0008283 cell proliferation GO:0007446 imaginal disc growth GO:0018149 peptide cross-linking GO:0016021 integral to membrane GO:0007156 homophilic cell adhesion GO:0050839 cell adhesion molecule binding GO:0004872 receptor activity GO:0045571 negative regulation of imaginal disc growth GO:0045317 equator specification GO:0042067 establishment of ommatidial planar polarity GO:0016318 ommatidial rotation GO:0001737 establishment of imaginal disc-derived wing hair orientation GO:0045198 establishment of epithelial cell apical/basal polarity GO:0007164 establishment of tissue polarity GO:0030178 negative regulation of Wnt receptor signaling pathway GO:0005509 calcium ion binding GO:0005886 plasma membrane GO:0040008 regulation of growth GO:0045926 negative regulation of growth GO:0001736 establishment of planar polarity GO:0016337 cell-cell adhesion GO:0007476 imaginal disc-derived wing morphogenesis GO:0048105 establishment of body hair planar orientation GO:0008285 negative regulation of cell proliferation GO:0046620 regulation of organ growth GO:0035329 hippo signaling cascade GO:0035159 regulation of tube length, open tracheal system |
InterPro families    | IPR002126 Cadherin IPR015919 Cadherin-like IPR020894 Cadherin conserved site |
Orthology group | MCL10052 |
Nucleotide sequence:
ATGCAGTCCCGCGCTGTGGATACCGGTGTCGATCTCCGTGTACCCGAGTCTCAACCTATT
GGAACCAATGTCGGAAGAATACCTATTAAACCTGGTTTTACTTATCGTTTTAATGAGCCG
CCTAAGGAATTCGTTCTAGATCCTGTATCTGGTGAAATCAGAACTAATGTAATTCTTGAT
CGGGAAAGTGTTGATCGTTATGCTTTTGTCGTTTTATCAAGTCAGCCAACGTATCCTATC
GAAGTGCGTCTTAGAGTTACTGATGTCAATGATAACTCCCCAGAGTTCCCCGAACCGGTG
ATAGCTGTGGCATTTTCAGAGAGTGCAGCTCCAGGGACTAAGTTGTTATTAGACGCGGCT
ACGGATAAGGATTTAGGTGAAAATGGAATTGCCAACGATTACAGAATAGTCGACGGCGAT
AATGAAGGAAAGTTTAGATTGAACGTTACTGTCAATCCTAGTGGACAAACTTCTTATTTA
CATTTAGAAACTACAGGAAAATTAGACAGAGAAACAAATGATTTTTACATTTTAAATATC
TCTGCACGTGACGGTGGTAGTCCTCCAAAGTACGGGTATCTTCAAGTGAATGTTTCAATT
TTAGATGTAAACGATAACCCTCCTATATTTGATCAAAGCGATTTTTCAGTATCACTTAAT
GAGAGTGTTCCTCCCGGAACTACTGTCCTTAAAGTGACCGCAACGGATAGTGATTTGGGT
GATAATAGCAAAATTACTTATGAAGTGACTGATACAGAAAAACAGTTCGCCGTTGACCCA
GAGTCCGGTGTTATAACGACATTAAAAAAATTGAGTTGTCCAAAATATTGCAGTAACACA
ACTTGTAATATGACGTGTGTTCTTACAGTTATAGCAAAGGACCACGGAGTACCACGTCAA
GATGCCAGAACATATGTAACTGTCAATTTGATCGATGCTAATGATCACGATCCAGTTATC
ACTTTTACTTATGTACCATCGACAGCTAACTTTGCAACAGTGGATGAAAATGCTAAAAAT
GGATCACTTGTTGCTGCTATTACTGTAACAGATTTAGATGCTGGTCTTAATGGAATAACG
AGCATTAAAATAGTGGCAGGAAATGAATTAAATCATTTTAGACTGGAAAACTCAAGCAGT
GTGTATATAGTTCATGTTAATGGTATTTTAGATAGAGAGGAAATAAGTAAATATAATTTA
ACTGTAGTAGCTACTGATAAAGGTACACCCCCACGTACTGCTACTTCGTTTCTAGTAATT
CACGTAAATGATGTCAATGATCATGAACCTGTATTTGAAAAATCTGAATACTCTACAGTT
CTTAGTGAATTGGCTCCCATTGGAACATATGTCGCTGGAATAACAGCAACAGATGAAGAT
ACGGGAGTCAATGCTGAAATTTTTTATGATTTTTATGACGGTAACCAACAACAATGGTTT
TTTATTGATCACTATACGGGCCTAGTAACAACTAGATCAGTTTTAGACAGAGAGATCCAA
GGCACTGTCGAATTAAATGTGTCAGCCCGTGATGGTGGGCCAAACCCTAAATGGGCATAT
ACAAGGCTAAAAATTACTATATTAGATGAAAATGATGAGGCACCTAGTTTTCCTCAACTT
CAAATTAATACATCACTACCAGAAAACGTGAAACCGTTAAAAGAAATTCTTATTTTAACT
GCTTCCGACTACGATCAAGGAACAAATGGATCTGTGTCATATTACTTGTCATCAAATATT
GAAAGGAAATATCCTAACACTTTTATGTTGGATCCAATAACTGGTCAATTAAGCGCTGTT
ACAGAATTAGATAGAGAAAGAATTCCATTGTATGAGATACAGGTTATAGCAAAAGATCAA
GGTTACCGTCCACAATCATCTACAGCCACAGTTTTCTTAAGAGTAATTGATGTTAATGAT
AATGATCCAATATTCTATCCTCAGAGATATTTCGAAAGTATAAGAGAAGATTTGGCACCA
GGGTCTAGGGTTCTACAAGTAAAAGCATTTGATCTTGACGAGGGGGACAATTCTAAAGTA
GTATACAAGTTAGAAAGTGGTGGTGAAGGCTATTTTGATGTTGAACCTGAAAATGGGTAT
ATTTATGTTAAGAGTCCTCTCGACAGAGAAGAAAAGGATTATTATTCATTAACTATCGTC
GCATCAGACCACGGGAAACCGTCAAGATCATCTCAAGTCCCAGTAGTTATTCACGTTCTT
GATGAAAATGACAACAGTCCACAGTTCACGAATACTACATTTATTTTTAAAATAAAAGAA
AATGAACCGCCTGACACTTTCGTGGGTAAATTAACTGCTACTGATAAAGATATCGGGCGT
AATGCAGAATTAACTTTCAGCTTACCAATTGCTCAAAATGATTTCAGAATTGATTCGAGA
AATGGATTTATTAAAACATTAAAGTCATTTGACAGAGAAAATTTATCCCAGAATAGCGGT
CAAAATTATATAACGTTAACCGTTACTGTAAGTGATAATGGAAAAGTAAAACTTTCAGAT
TCTGTTAGAGTTACCATATATGTCACAGATGTAAATGATAATTCACCAATCTTTACACGT
ACTCCTTATGCAGTCGAAGTATCTGAAGGAGCAGTTGTTGGTGCTTCAATCATGAGGGTT
TATTCTTCGGATGCCGATGAAGGTCTAAATGGTGACGTTTATTATAAGCTGATAGGAGGT
GATGATTTAGGAAAGTTTGTGCTTGATGAAGCTACAGGACAACTTTTTATAAATAAGCCA
TTAGATAGAGAAAGTATAGACCATTACGTACTCACAGTTATAGCACATGATTCGGGACAA
ACAACTCGGCTTTCTTCAACAACAATAATCACGGTAGATGTTCTGGATGAAAATGATAAT
GCACCCGTATTTGAACAGTCTCAAATGAATGTGTCTGTGTTGGAAACAGAGCCTGTTAAT
AAAAAAATTATTCAATTTCATGCCAATGATGCCGATTTGGGCATAAATAATGAATTGCAA
TATTCAATTACATCTGGAAATAGAAAAGAGACATTTTTTATTGACAGTTACTCAGGGGAG
CTATTTTTACATAAGCATTTGGATTATGAAGATTTGACATCGTACGTCCTAAACATAACG
GCGACTGATAACGGAAACCCAAGTCTATCATCTAGTATCACATTTACTGTCACTGTTATA
GATGCAAATGATAATGCTCCAATATTTACGAATACAGCTATAGTACGTCAAATTAGGGAA
GGAATTCCTATGCATACTCCAATTGTCACTGTTACTGCAGAAGATCCCGATTCAGGATGG
AATGGAAAAGTTTACTATTCCATTACTCATCAAGATCCCAGTAACGGAAAAAGACATTTT
GCAATTAATAATGTCACAGGCGTTATATACACTTTATTGCCTATTGACAGAGAAATCATT
GACACCTTTAGAATAACTGTAGTGGCTTGCGATAAAGCTGAACCTGCGTCCAGTAGATTG
TGTTCTGAAAAATTGGTAACTGTAATTGTTGAGGATATCAATGATAACGCCCCAGTATTT
GTGTCCATGAATGCCGCTGTTATTAACTCTGAAAGATTGGGTAGAAGTATGAGTCGAGGC
AAATTCATTATGAATGTTTTGGCTAGAGATTTGGATTCCGGGACTAATGGTCTAGTAACG
TATAAGTTAATTCATGGAGGGAATGACATGTTTGATCTTCATAGGAGTAATGGTGCGCTA
AGTCTACGTTATCCTCCATCAATGCCTGATGTAAGATGGAATTTAGTTATAAAAGCCACA
GATGAGGCAGTTTTAAGTGAACAGAGGAGTACTGAAACTTACTTAACTGTGATCATGGGA
GGAACTGAACTGGAAGGTATTATGTGGACGAATGTAGGATCTATTTCCGTAGCTGAAAAT
GAACCAGCCGGAACTGCTGTGCTAAACATGACTAACAATTACAAAGGTGGTTTAGAATAC
TATATAGTGAATGTGACTGGTGATAATAAACAAGTGGATAGGTTATTTGATATAGATTCG
TCCTTGGGCATTTTATCCACTGCTGTTTCATTGGACAGAGAGGCTGGTGTCGATCGTTAC
GAAGTGGAAATTTGTGCTGTATCATCAGGAAGTCCTTTGCAATCCACAACCACAAAGGTA
ATTTTTTAA
Protein sequence:
MQSRAVDTGVDLRVPESQPIGTNVGRIPIKPGFTYRFNEPPKEFVLDPVSGEIRTNVILD
RESVDRYAFVVLSSQPTYPIEVRLRVTDVNDNSPEFPEPVIAVAFSESAAPGTKLLLDAA
TDKDLGENGIANDYRIVDGDNEGKFRLNVTVNPSGQTSYLHLETTGKLDRETNDFYILNI
SARDGGSPPKYGYLQVNVSILDVNDNPPIFDQSDFSVSLNESVPPGTTVLKVTATDSDLG
DNSKITYEVTDTEKQFAVDPESGVITTLKKLSCPKYCSNTTCNMTCVLTVIAKDHGVPRQ
DARTYVTVNLIDANDHDPVITFTYVPSTANFATVDENAKNGSLVAAITVTDLDAGLNGIT
SIKIVAGNELNHFRLENSSSVYIVHVNGILDREEISKYNLTVVATDKGTPPRTATSFLVI
HVNDVNDHEPVFEKSEYSTVLSELAPIGTYVAGITATDEDTGVNAEIFYDFYDGNQQQWF
FIDHYTGLVTTRSVLDREIQGTVELNVSARDGGPNPKWAYTRLKITILDENDEAPSFPQL
QINTSLPENVKPLKEILILTASDYDQGTNGSVSYYLSSNIERKYPNTFMLDPITGQLSAV
TELDRERIPLYEIQVIAKDQGYRPQSSTATVFLRVIDVNDNDPIFYPQRYFESIREDLAP
GSRVLQVKAFDLDEGDNSKVVYKLESGGEGYFDVEPENGYIYVKSPLDREEKDYYSLTIV
ASDHGKPSRSSQVPVVIHVLDENDNSPQFTNTTFIFKIKENEPPDTFVGKLTATDKDIGR
NAELTFSLPIAQNDFRIDSRNGFIKTLKSFDRENLSQNSGQNYITLTVTVSDNGKVKLSD
SVRVTIYVTDVNDNSPIFTRTPYAVEVSEGAVVGASIMRVYSSDADEGLNGDVYYKLIGG
DDLGKFVLDEATGQLFINKPLDRESIDHYVLTVIAHDSGQTTRLSSTTIITVDVLDENDN
APVFEQSQMNVSVLETEPVNKKIIQFHANDADLGINNELQYSITSGNRKETFFIDSYSGE
LFLHKHLDYEDLTSYVLNITATDNGNPSLSSSITFTVTVIDANDNAPIFTNTAIVRQIRE
GIPMHTPIVTVTAEDPDSGWNGKVYYSITHQDPSNGKRHFAINNVTGVIYTLLPIDREII
DTFRITVVACDKAEPASSRLCSEKLVTVIVEDINDNAPVFVSMNAAVINSERLGRSMSRG
KFIMNVLARDLDSGTNGLVTYKLIHGGNDMFDLHRSNGALSLRYPPSMPDVRWNLVIKAT
DEAVLSEQRSTETYLTVIMGGTELEGIMWTNVGSISVAENEPAGTAVLNMTNNYKGGLEY
YIVNVTGDNKQVDRLFDIDSSLGILSTAVSLDREAGVDRYEVEICAVSSGSPLQSTTTKV
IF