New model in OGS2.0 | DPOGS213054  |
---|---|
Genomic Position | scaffold2405:- 10825-13358 |
See gene structure | |
CDS Length | 687 |
Paired RNAseq reads   | 195 |
Single RNAseq reads   | 585 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007672 (1e-73) |
Best Drosophila hit   | Rab9 (4e-64) |
Best Human hit | ras-related protein Rab-9B (3e-53) |
Best NR hit (blastp)   | PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] (1e-69) |
Best NR hit (blastx)   | PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] (1e-68) |
GeneOntology terms    | GO:0003924 GTPase activity GO:0042147 retrograde transport, endosome to Golgi GO:0015031 protein transport GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction |
InterPro families    | IPR013753 Ras IPR005225 Small GTP-binding protein IPR020851 Small GTPase IPR001806 Ras GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase |
Orthology group | MCL11879 |
Nucleotide sequence:
ATGGTCGAGGATAATGATCAAAGTTACGGGAGGAACGCAAATAAAAGCGTTCTTTTAAAA
ATTGTGATCCTCGGCGACGGAGGCGTTGGTAAATCATGTTTAATGAGTAGATTTATATCG
AATCACTTCGACGACCACAACTTTCACACGATAGGTGTGGAGTTCATGAACAAAATGATA
GAAGTCGGAGGCAAACAATATACTTTACAGATCTGGGACACAGCTGGACAGGAAAGATTC
AAGTCTCTCAGGACTCCGTTCTACAGAGGAACGGACATTTGTATTTTAGCATACGCCATA
GACGACAGGAGTTCTTTCAACAATATTAAAACATGGCTGAATGAGTTTCTTAATTATGCT
GGTGTCAAAAATGGAATCGAGAAATTCCCATTCATAGTTGTTGGAAATAAGTCAGATGTA
TCGTCCAAAGATAGGGAGGTACCATATGAACAATTGAAGCAGTGGTGTGAAGAAAATAAA
ATATCGACATATCTGGAGACCTCCGCTAAGACAGACAATAATGTTCTCGAAGCATTCTCA
TTATCGGTGCAAAGATGGGCTGATCTAGAACAGAAGGCAGAAAAAGAGCTCCGGATGTAC
CACCATCCGGACACCGTCACATTGCATGGATCCAACAATGTGTCCGGCTTCAGAGCAACC
TGCTGTTCGCGATTCACTAGTTTGTGA
Protein sequence:
MVEDNDQSYGRNANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMI
EVGGKQYTLQIWDTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYA
GVKNGIEKFPFIVVGNKSDVSSKDREVPYEQLKQWCEENKISTYLETSAKTDNNVLEAFS
LSVQRWADLEQKAEKELRMYHHPDTVTLHGSNNVSGFRATCCSRFTSL