DPGLEAN16578 in OGS1.0

New model in OGS2.0DPOGS213054 
Genomic Positionscaffold2405:- 10825-13358
See gene structure
CDS Length687
Paired RNAseq reads  195
Single RNAseq reads  585
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007672 (1e-73)
Best Drosophila hit  Rab9 (4e-64)
Best Human hitras-related protein Rab-9B (3e-53)
Best NR hit (blastp)  PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] (1e-69)
Best NR hit (blastx)  PREDICTED: similar to ras-related protein Rab-9 [Tribolium castaneum] (1e-68)
GeneOntology terms



  
GO:0003924 GTPase activity
GO:0042147 retrograde transport, endosome to Golgi
GO:0015031 protein transport
GO:0005525 GTP binding
GO:0007264 small GTPase mediated signal transduction
InterPro families






  
IPR013753 Ras
IPR005225 Small GTP-binding protein
IPR020851 Small GTPase
IPR001806 Ras GTPase
IPR003577 Ras small GTPase, Ras type
IPR003579 Ras small GTPase, Rab type
IPR003578 Small GTPase, Rho type
IPR002041 Ran GTPase
Orthology groupMCL11879

Nucleotide sequence:

ATGGTCGAGGATAATGATCAAAGTTACGGGAGGAACGCAAATAAAAGCGTTCTTTTAAAA
ATTGTGATCCTCGGCGACGGAGGCGTTGGTAAATCATGTTTAATGAGTAGATTTATATCG
AATCACTTCGACGACCACAACTTTCACACGATAGGTGTGGAGTTCATGAACAAAATGATA
GAAGTCGGAGGCAAACAATATACTTTACAGATCTGGGACACAGCTGGACAGGAAAGATTC
AAGTCTCTCAGGACTCCGTTCTACAGAGGAACGGACATTTGTATTTTAGCATACGCCATA
GACGACAGGAGTTCTTTCAACAATATTAAAACATGGCTGAATGAGTTTCTTAATTATGCT
GGTGTCAAAAATGGAATCGAGAAATTCCCATTCATAGTTGTTGGAAATAAGTCAGATGTA
TCGTCCAAAGATAGGGAGGTACCATATGAACAATTGAAGCAGTGGTGTGAAGAAAATAAA
ATATCGACATATCTGGAGACCTCCGCTAAGACAGACAATAATGTTCTCGAAGCATTCTCA
TTATCGGTGCAAAGATGGGCTGATCTAGAACAGAAGGCAGAAAAAGAGCTCCGGATGTAC
CACCATCCGGACACCGTCACATTGCATGGATCCAACAATGTGTCCGGCTTCAGAGCAACC
TGCTGTTCGCGATTCACTAGTTTGTGA

Protein sequence:

MVEDNDQSYGRNANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMI
EVGGKQYTLQIWDTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYA
GVKNGIEKFPFIVVGNKSDVSSKDREVPYEQLKQWCEENKISTYLETSAKTDNNVLEAFS
LSVQRWADLEQKAEKELRMYHHPDTVTLHGSNNVSGFRATCCSRFTSL