New model in OGS2.0 | DPOGS213156  |
---|---|
Genomic Position | scaffold2405:+ 3578-5682 |
See gene structure | |
CDS Length | 1017 |
Paired RNAseq reads   | 979 |
Single RNAseq reads   | 2965 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007912 (5e-116) |
Best Drosophila hit   | CG7675, isoform B (1e-38) |
Best Human hit | retinol dehydrogenase 12 (2e-41) |
Best NR hit (blastp)   | restnol dehydrogenase, putative [Pediculus humanus corporis] (2e-93) |
Best NR hit (blastx)   | restnol dehydrogenase, putative [Pediculus humanus corporis] (2e-88) |
GeneOntology terms    | GO:0016491 oxidoreductase activity GO:0055114 oxidation reduction GO:0008152 metabolic process GO:0005488 binding GO:0003824 catalytic activity GO:0005575 cellular_component |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain |
Orthology group | MCL15077 |
Nucleotide sequence:
ATGACAGATTTTACGATGTTGTCGTCAGATGTGATCAAATACGTGGCTGTACCTGTGTCT
CTAGCAGTCGCACTGGGATTGATACGAAAATGGAGATCAAGGAATTGGGCAAAGTGTACG
AGCAACACTTGTTTAAGGGGCAAGACCTTTCTTATTACGGGTGCCACTAGTGGTATCGGA
TTGGAAACGGCACGAGCTCTGGTGAAGAGGAAGGCTCGCGTGATATTTGCTTGTAGAGAC
ATCGATAAAGCAAAGAAAGTGGTTGCAGAAATTCGAACAGAATGCGACGGCGGCGAATTG
ATACCAATGCAATTGGATCTTGCATCTTTCACATCAATTGAAAAGTTCGTAGATGTTGTG
AAGGCCGGATTTTATAAAATTGATGTATTAATCAACAATGCAGGCGTGGCCATACCATTA
CAATTAGACCAGAAGACAAAAGAGGGTTTTGAAATACATTTGGGTGTTAACCACTTGGGA
CACTTCTATCTCACAAATTTATTAATTGATTTGTTAAAAAAAGCTGCTCCGAGTCGAATT
GTTATTGTCACATCAACCCTACATGAGAAGGCCAAACTGGATTTTGACAACCTATATGTG
GAAGACCAAATCGAGAAGGCCAAATTAGGAAAACGTTACCGCCACAACCCCGGCTACTGT
AACTCAAAACTCATGAATCTATACCACGCACGGGCATTGGCTGCAAAATATAGGAACTCA
GGAATAGACGTGTACGCCTGTTGCCCGGGCTTCTGTTATACTAATTTGTTCAGAGATGTC
GTTCAATGGTATCACTATGTTATCTTGGCTCCCGTCGCATTTTGGTACATGAAGACAGCG
AAACAGGGTGCAGAGACGGTGCTGCACTGCGCAACAGATTACCGTCTGGAGGGACACACT
GGGAAGATGTACCGCAACTGTACCGAGTACAGATCAACCTACCGCTTTAGTAAAGGAGAA
GAAAACAAGCTATGGGAAGTTAGCGAGGCTCTCGTCAAAGCCAGGAGACCTATTTAA
Protein sequence:
MTDFTMLSSDVIKYVAVPVSLAVALGLIRKWRSRNWAKCTSNTCLRGKTFLITGATSGIG
LETARALVKRKARVIFACRDIDKAKKVVAEIRTECDGGELIPMQLDLASFTSIEKFVDVV
KAGFYKIDVLINNAGVAIPLQLDQKTKEGFEIHLGVNHLGHFYLTNLLIDLLKKAAPSRI
VIVTSTLHEKAKLDFDNLYVEDQIEKAKLGKRYRHNPGYCNSKLMNLYHARALAAKYRNS
GIDVYACCPGFCYTNLFRDVVQWYHYVILAPVAFWYMKTAKQGAETVLHCATDYRLEGHT
GKMYRNCTEYRSTYRFSKGEENKLWEVSEALVKARRPI