| New model in OGS2.0 | DPOGS213157 |
|---|---|
| Genomic Position | scaffold2405:+ 25779-33268 |
| See gene structure | |
| CDS Length | 2034 |
| Paired RNAseq reads | 381 |
| Single RNAseq reads | 1013 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007914 (1e-11) |
| Best Drosophila hit | hormone receptor-like in 39, isoform C (1e-58) |
| Best Human hit | nuclear receptor subfamily 5 group A member 2 isoform 2 (2e-28) |
| Best NR hit (blastp) | hormone receptor 39 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | hormone receptor 39 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005634 nucleus GO:0004879 ligand-dependent nuclear receptor activity GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0003712 transcription cofactor activity GO:0003677 DNA binding GO:0016321 female meiosis chromosome segregation GO:0043565 sequence-specific DNA binding GO:0003707 steroid hormone receptor activity GO:0008270 zinc ion binding GO:0006919 activation of caspase activity GO:0035072 ecdysone-mediated induction of salivary gland cell autophagic cell death GO:0035211 spermathecum morphogenesis |
| InterPro families | IPR001628 Zinc finger, nuclear hormone receptor-type IPR000536 Nuclear hormone receptor, ligand-binding, core IPR008946 Nuclear hormone receptor, ligand-binding IPR001723 Steroid hormone receptor IPR013088 Zinc finger, NHR/GATA-type |
| Orthology group | MCL15226 |
Nucleotide sequence:
ATGTCTAGTGAGGGGGAGGCGGTGAAAGTGGAAGGGGGTCATATCTCCGTCACTACTATC
AGCATGTCGGGACCGGAGAGTAGCAATGGGCAGTTCTCGTATAGCTCGAGCGGAGTCCGT
ATCAGCGTGTCCTCGGAGCCTCAAGACGAGGATTCGACGGACGCGGAAATATCCAAAATA
GATTTCACCCAACACCAGTATGAGGTCAACATGCGGAATAAGAAGAAGCGTTCGTCCGGC
CAGTGTGACCAGGCCAAGGAGCAAGAGAGGCCGATGTCCTGGGAGGGAGAGCTGTCAGAC
TCGGAAATGGTCATCGACACCAGCACCAATAACGTAGACGAGAACAGCAGCTCCCTGGAC
CTCCAATCCTCCCGGGATTCAATCGACACGCTCCGCAACGTGTCCATTAAGACTGAACCT
CTTAAAACAGAGCTCTTCCACACTATGGAGGACCAACGTGTTCTGGACCTGAAGTATACC
GTGCCTCTTCAGTCACATCAGCGCAGTCTTAGTATGAATAGGATATCGGTCCTAACAGAC
AGTAATTCGTTGTTAGCGCGGCGGCCGTCATCACCCTCGCACTACGACGCGCATCCCGAG
GTCCAGAACCTCACTATCAAGAAGGAACAGCTCTCTGAACTCAAGTCCGAACCGACGTCC
AGTGTGGACAAGCTGCTAGGGCTCCACGGTTCCCCCCTGATGGGACGCCTCCCCCGCGTG
CAGTCCAGCGCCAGCACTGACTCCGCGGTACACTCAATGTATACACACAGTGTATACAGC
AGTCCGTCAGCCAGCCCCCGCCCCTCGCGCCACTACACCCCCTCCCTCTCCCGGAACAAC
AGCGACGCGTCACACTCCTCGTGCTACTCCTACAGCTCAGAATTTTCCCCCACTCACTCT
CCAGTACAAAGTCGTCACCCCCACGTGGTGTACCGCGAGGCGGCCGTGTTCCCCGCCTCC
CCCGCTCATGATGAGGACGCGGACGGAACCGACGACAGGCTGCATCATCACCAGGGGATC
AGCCGCCAACAACTCATTAACAGTCCGTGTCCAATTTGCGGCGACAAAATCAGTGGCTTC
CACTACGGGATATTTTCATGCGAGTCTTGCAAGGGCTTCTTCAAGCGGACGGTTCAAAAT
CGGAAGAACTACATGTGTCTGAGAGGCGGGAACTGTCCCGTCACCGTCGCCACCAGGAAG
AAGTGCCCCGCGTGTAGATTCGATAAGTGTCTGGGATGCGGGATGAAACTCGAAGCTATA
AGAGAGGACCGCACACGCGGCGGTCGGTCTACTTATCAATGTTCGTACACGCTGTCTGGC
GCGGCCTCCACGGGCTCCTTACTATCAGCGCACGCGCCCGCAACGCTGAGACACGCCTCG
AGTCTCACATGTGTGAACGGTCCGGGCTCCTACAACAGAGGCGAATCAAGCAACAGTCGA
CTCACCCCTGACATACCGCCGTTATTGCAGGAAATAATGGACGTGGAACATCTATGGCAG
TACAACGAGTCCGAGCTGAGTCGTATGAGCAAGAGCTCGAGCAGTCCGTCCGCCAACCCC
CTGTTAGCGGCCAGCGGCATCACGGCGCAGAACTCTAGCGCCGACTTCCTGGCCGACCTG
TGCAATATAGCAGACCACAGATTATACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTC
TTTAAAAATATCTCCATCGACGATCAGATATGTCTGTTGATAAACAGCTGGTGCGAGTTA
CTGGTGTTGTCCTGTTGCTACAGAGGAGTCAGCACGCCAGGGGAGGTGCGGGTGGGGGGA
GGCAGGGGAATAACGCTGCAGCAGAGCGCCAAGTATGGCCTAACTCCATGTATTGAACGT
ATGTTGAGTTTCACTGATCACTTGAGGAGGCTGCGTGTGGACCGCTACGAGTACGTCGCG
CTCAAGTTTTTCATGCAAGTCGGAAAAGAAATGCTCAATCCAGCGAACAAGAGTAAGGAC
GGAGAGGGACCGAGCTTCAACCTCCTCATGGAACTGCTTCGAGGAGATCATTGA
Protein sequence:
MSSEGEAVKVEGGHISVTTISMSGPESSNGQFSYSSSGVRISVSSEPQDEDSTDAEISKI
DFTQHQYEVNMRNKKKRSSGQCDQAKEQERPMSWEGELSDSEMVIDTSTNNVDENSSSLD
LQSSRDSIDTLRNVSIKTEPLKTELFHTMEDQRVLDLKYTVPLQSHQRSLSMNRISVLTD
SNSLLARRPSSPSHYDAHPEVQNLTIKKEQLSELKSEPTSSVDKLLGLHGSPLMGRLPRV
QSSASTDSAVHSMYTHSVYSSPSASPRPSRHYTPSLSRNNSDASHSSCYSYSSEFSPTHS
PVQSRHPHVVYREAAVFPASPAHDEDADGTDDRLHHHQGISRQQLINSPCPICGDKISGF
HYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAI
REDRTRGGRSTYQCSYTLSGAASTGSLLSAHAPATLRHASSLTCVNGPGSYNRGESSNSR
LTPDIPPLLQEIMDVEHLWQYNESELSRMSKSSSSPSANPLLAASGITAQNSSADFLADL
CNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGG
GRGITLQQSAKYGLTPCIERMLSFTDHLRRLRVDRYEYVALKFFMQVGKEMLNPANKSKD
GEGPSFNLLMELLRGDH