| New model in OGS2.0 | DPOGS213159 |
|---|---|
| Genomic Position | scaffold2405:+ 46634-50776 |
| See gene structure | |
| CDS Length | 993 |
| Paired RNAseq reads | 78 |
| Single RNAseq reads | 191 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007917 (6e-110) |
| Best Drosophila hit | CG9876 (2e-28) |
| Best Human hit | paired mesoderm homeobox protein 1 isoform pmx-1b (1e-22) |
| Best NR hit (blastp) | Ultrabithorax, putative [Pediculus humanus corporis] (2e-29) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000527 [Tribolium castaneum] (8e-27) |
| GeneOntology terms | GO:0005634 nucleus GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR001356 Homeobox IPR009057 Homeodomain-like IPR017970 Homeobox, conserved site IPR012287 Homeodomain-related |
| Orthology group | MCL40205 |
Nucleotide sequence:
ATGGATCATGTTAAAGATAATCCGAACGGTCAAAAGCAAGACGTTATTTCCAGGAATTTT
GAAACCAAATCTCAAAGTCAACTAAACTATAATACTTCAAATTATTCAGAAAACAATATC
TACCAGATGATAAAATGCCACGAGGATAGCTTGCTAAGGCTTCATCATTTAACTGCGGGG
CGCAACATCAATGCTACTTACGACAGTGGGTACCAGAACGACATTCCATGGTATCCAAAG
GACTTACAACGACAATATATAAAGCCCGTGGAGTACTTGGCATACGAAGATATGAGGAGG
AAGTTTGATGAAGCAAAAGGAAAAGAGAGAGAACGAAAAGACCAAGAAGAAGAAAAGGAC
GGAAAGAACGACGAAAGAAAAAAGCCAAGACGAAATAGAACTACGTTCACAAGTCAACAG
CTAGCTGCGTTAGAAAAGGTGTTTGAAAAAACTCACTATCCAGATGCGTTCGTGCGAGAA
GATCTTGCGTCGAGAGTGAATTTAACTGAAGCCCGAGTTCAGGTTTGGTTTCAAAATCGA
CGTGCTAAGTTCCGAAGAAATGAAAGATCAGCTTTGTCCTCCCACAGGACGTCCACGCAA
AATTCTCCTGAACCGATACCAGTTCCGATCGGTATCCCGCAGGTTGACCCTCGACAGGAT
TTCAATCGTAACGCCAAGGAACCCTGGATGCATCACTTCCAGCCTAATAACCTCAACTTC
AATTTGGGCCTGCCTATAACAAATTCTAGTTTATACCAAAACGACTATGCGCTTATGATG
CAAAATGTTGGCAACCGTCAGTATGTTTCTAATACGAATTCGCTCATGGCACAGAATGTC
CCTGGTTACGGATCTTCTAATGAGAACAATTACAGTTCGTGTGCATTGATAGGAAGCTAC
AGTGGCGCTCTACAGCCGGCCCACCACAGCTCCTACAATTTAAACTTAAGAATTAGACCT
CATGATTTTACCATAAACAACATAACGCTTTGA
Protein sequence:
MDHVKDNPNGQKQDVISRNFETKSQSQLNYNTSNYSENNIYQMIKCHEDSLLRLHHLTAG
RNINATYDSGYQNDIPWYPKDLQRQYIKPVEYLAYEDMRRKFDEAKGKERERKDQEEEKD
GKNDERKKPRRNRTTFTSQQLAALEKVFEKTHYPDAFVREDLASRVNLTEARVQVWFQNR
RAKFRRNERSALSSHRTSTQNSPEPIPVPIGIPQVDPRQDFNRNAKEPWMHHFQPNNLNF
NLGLPITNSSLYQNDYALMMQNVGNRQYVSNTNSLMAQNVPGYGSSNENNYSSCALIGSY
SGALQPAHHSSYNLNLRIRPHDFTINNITL