| New model in OGS2.0 | DPOGS203711 |
|---|---|
| Genomic Position | scaffold95:+ 18405-30114 |
| See gene structure | |
| CDS Length | 5469 |
| Paired RNAseq reads | 13799 |
| Single RNAseq reads | 32414 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003497 (9e-15) |
| Best Drosophila hit | Chromodomain-helicase-DNA-binding protein 1 (0.0) |
| Best Human hit | chromodomain-helicase-DNA-binding protein 2 isoform 1 (0.0) |
| Best NR hit (blastp) | chromodomain-helicase-DNA-binding protein 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | chromodomain-helicase-DNA-binding protein 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005705 polytene chromosome interband GO:0004386 helicase activity GO:0003682 chromatin binding GO:0005703 polytene chromosome puff GO:0008026 ATP-dependent helicase activity GO:0003677 DNA binding GO:0006333 chromatin assembly or disassembly GO:0005524 ATP binding GO:0005634 nucleus GO:0000785 chromatin GO:0035042 fertilization, exchange of chromosomal proteins GO:0048477 oogenesis GO:0007476 imaginal disc-derived wing morphogenesis |
| InterPro families | IPR000330 SNF2-related IPR000953 Chromo domain IPR001650 Helicase, C-terminal IPR014001 DEAD-like helicase IPR016197 Chromo domain-like IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
| Orthology group | MCL11646 |
Nucleotide sequence:
ATGCACTTGGCTGGTTCTATGGCTGAATCTGGAAGTGAATCTATTAGTGAGAAGGGAGGC
AAAAGTGATTCAAGTGGGTCAGGTTCTGGAAGTGACAGTGACAGTGGGTCTAGTTCTTCT
GGTTCTGGCTCCGGAGGCAGGTCTGGTTCTGAAAAATCTTCAAATGGGGATCGTTCACAC
CTAAGTGATGATACCAAGGGATCTCCAAAGCACAGTAATGCTAATTCTTCAAAGTCTGAT
CGTCACTCTGACAAAGACTCCTCCGATGATTCTATTACAAAGCGTAAGTCAAGAAACAAT
CATGGAAAAGTTAAATCAGATCTTTGGGAAGATAACCCTGATATTTATGGTATTCGGAGA
TCAGCCAGGTCAAGGAAAGAGCCAGACAGACTTAAGGTAGCTGATAGTGATTCAAGTGAT
AAAGGTCAAAGCCACAGTAGAAAAAGTAGGAAAAGAAGTGACTCATGGAATTCAGATACA
TCAGATAGTGATAGTGATATGAAAGGTTCTCCACCTCCGCCGTCTAAGCGTCCGGGCCAA
AGAAGTGTTCCTCTCAGAAAAAAGAAACCCACAAGGAGAAGAAGGTTTACAAGTGACGAA
GAAGAAAGTTCAGAAGCATCTGATGAAGATACCAAAAGTCGGACGGCTACTCGACGAACA
GGTGCTGCTGTTAGTTACAAAGAAGCCAGTGATGAACAAACAGACTCTTCCGACCTCTGT
GGAGATGCTGAAGCTGAACCGGAGCCTGAACCAGAAGACCATAGTGAGACTATTGAAAGG
GTTCTTGGCCATAGACGAGGGAAGAAAGGAGTCACTGGAAATGTGACTACAGTTTACTAT
ATAGAGGAAAACGGTGATCCTAATGAGGATTGTAATCCTGATGATGAAGATTCGACTGAA
CCACAGTACCTGATTAAATGGAAAGGATGGTCGCATATACATAACACTTGGGAGTCCGAG
AAAAGTCTTAATGAACAAAAAGTTAAGGGACTTAAGAAATTAGAGAATTATATAAAGAAG
GAGGCTGATCTGTCATGGTGGAGGCAGCAAGCTGGTCCTGAAGATATAGACTATTATGAA
TGTCAGTCTGAACTGCAGCAGGAATTAGTCAAAACATACAACAATGTTGAAAGGATAATA
GCTGAACAAACAAGAGAATTAGAAGGAGGTGGAACTGCTCATGAATATTTCTGTAAATGG
GAATCTCTACCATATGCCGACGCAACCTGGGAAGATTCATCTCTTATTGAAAAAAGGTGG
CCTGAGAAAGCTGAGAATTTTAAAAGTAGGGAAGCTGCTAAGACAACACCGTCAAGGCAT
TGCCCTGTTTTAAAAAGACGTCCAAAATTTCATCAAGTCAAAGAACAACCAGAGTATATG
GGTAAAGATCAGACATATGTGTTAAGGGATTATCAAATGGATGGATTAAATTGGCTAATA
CATTCCTGGTGTAAAGACAATTCTGTTATTTTAGCTGATGAGATGGGTTTAGGAAAAACT
ATACAAACAATTTGTTTTTTATATTATCTTTTTAAATCTCAACAACTATATGGACCATTT
CTTTGTGTTGTGCCCTTAAGTACTATGACTGCCTGGCAGAGAGAGTTTGCGCAGTGGGCG
CCGGATATTAATGTAGTTACATACATTGGTGATGTTACAAGCAGGGATATTATCAGACAG
TTTGAATGGAGCTTTGCCAGTTCAAAGAGACTAAAATTTAATGCCATTTTAACTACCTAT
GAGATATTATTGAAAGATAGACAATTTCTTAGATCATTTAGTTGGGCCTGTTTATTAGTG
GATGAAGCACATAGATTAAAAAATGATGATTCTCTGCTTTACAAAGCCCTTAAGGAATTT
GAAACAAATCATAGGTTATTAGTTACTGGTACACCTTTACAAAACTCACTAAAAGAATTG
TGGGCACTGCTTCATTTTATAATGCCATACAAGTTTGAAACCTGGGAGGAATTTGAAAAA
GATCATGAGGATGCTGCCACTAAGGGATATGAGAAGCTCCACAAACAGCTAGAGCCTTTC
ATTTTAAGAAGGCAGAAAAAAGATGTAGAGAAATCGTTACCTGCTAAAGTGGAACAAATT
TTGCGTGTAGAGATGACTTCAATACAAAAACAATATTACAAGTGGATATTGACAAAGAAT
TACAGTGCACTACGGAAGGGTGTGAAGGGCTCAATTAATACATTTATCAATATTGTAATA
GAACTAAAAAAGTGCTGTAATCATGCACTTCTAACCAAACCTGAAGATTTTGAATCAAGA
GCATCTCTTGCTACTACAGATGCTGTTGAGAAACTCTTAAGAGGCTCCGGCAAGCTACTT
CTTTTAGATAAATTATTGTGCAGGCTTAAAGAAACAGGTCATAGAGTGCTTATATTTTCT
CAAATGGTTAGAATGTTGGATATTTTAGCTGAATACTTGCAACGGAGACATTTTCCTTTT
CAACGTCTTGATGGAAGCATAAAGGGGGAAATCAGGAAGCAGGCTCTTGATCATTTCAAT
GCTGAAGGATCTCAAGATTTTTGTTTTTTACTATCAACACGTGCCGGAGGATTAGGAATT
AATTTGGCTACAGCTGACACTGTGATAATTTTTGACTCTGACTGGAATCCACAAAACGAT
CTCCAAGCTCAGGCTCGCGCTCATCGTATTGGGCAAAAAAATCAGGTCAATATTTATCGG
TTAGTAACTGCCAGGTCCGTAGAGGAAGATATTGTTGAAAGGGCTAAAAGAAAAATGGTA
CTTGACCATCTTGTAATTCAAAGAATGGATACAACAGGGAGGACAGTCTTAAATAAACGG
GACGCCACCGGAACCAGCGCAAATAATCCGTTTAATAAAGAAGACTTGAATGCTATTCTT
AAATTTGGAGCAGAGGAATTGTTTAAAGATGACGATGAAAATGATGAAGACCCTGTATGT
GATATAGATGAAATCTTGCAAAGAGCAGAGACAAGGGACGAAGGGCCTTCAATGGCAGGC
GATGAACTGCTTTCTGCATTTAAAGTGGCGAGTTTTGCTTTTGACGAAGACAAGGCGGTT
ATGGAGGTCAAAAAAGAAGGAGGAGATGAAGAAGCAAAAGATTGGGATGACATTATACCA
GAAAATGTTAGAAAAACTATAGCAGAACAAGAGAAAAATAAAGAAATGGAAGACTTGTAC
TTACCACCCAGAAGAAAAAATAATCAGAATAATGCTGATAGTGGTGGTCGTAAGCGTCGC
GGTCGTAGCGGAGGTGATGCGGGTGACGGGGGTGAGGCGGGGGACGGTGACGGTGACGGT
GACGACAGCGAAGCCTCGGACGGAGACGGAGACGCCAGCGCCGATGACGACCGACCTCGG
AAACGGGGACGGCCACCAGCCTCGCACAGAGAAAAGATCAAAGGATTCACTGATCAAGAG
ATAAGAAGATTCGTCAAAAGTTACAAGAAATTCTCAGCTCCCTTGAAACATCTAGACAGC
ATTGCATGTGATGCTGAGCTGCAGGAAAAACCACTAGCAGACCTGAAAAAGTTAGGAGAA
ATTCTTCAAGAAAGATGTAAAGCTGTATTAAATAATACGGCTGATGCACCTAATGAACAA
AGTGATGGTCGTAAAAATGCAAGAAAGACTTTTAAACTTGGAGGAGTTCCTGTAAATGCT
AAAACAATGGCTGCCTGCCAGGATGAACTTGCACCATTAGATGAATTCTTGCCACAAACC
AAGGAAGAGAGGCTCAAATGGCAGTTAGATTTCAGGACAAGACCAGCTAATTTTGATGTC
GAATGGGGAGTAGAAGATGATTCGAAGCTATTGGCCGGCATTTATCAATACGGGATGGGA
TCTTGGGAAGCCATAAAGATGGACTCATCTTTTGAAATCTGTGATAAAATACTTACAAAT
GAAGATAAAAAGCCGCAAGCAAAGCATTTACAGTCTAGAGCTGAATATTTGTTGAAACTT
ATCAAAAAGCTTTTAGACCAGAAGAATGGAAAACAAAAACAGAGAAAACCAAGAGTTAAG
AAGGGGGCCAAGGAGCCTGTTACAAAAGATATAGTGGATGATGACGTTAGTACTGGCGAA
GAAAACAAAAGAACAAGAAGTGCCAAAAATGATAAAAATGACAAGAACAAATCCAAAGTA
GAAGAGGTGTTAACCCATGATGAAACATCAAATGATAGAAAAGAAAAGGATAGAAAACGC
ACAAAGAAGGATGGGAAAGACCGACTTAAAAATGAAAAGGTTAAAGGTCGCAAAAAACCT
GCTGGTCCTATGCATTTTACTGCAAATAATGAACCCAGAGCTTTAGAAGTCCTAGGTGAC
CTTGACCCTTCGGTATTTGAGGAGTGTAAAGAGAAAATGAGACCGGTTAAAAAGGCACTT
CGTGCATTAGATAATCCTGACCACACGTTGTCAGACACAGAACAATTGTCGCGAACAAGG
GCTTGCCTCACACAAATAGGAAACCAAATAGATATATGTTTATCTGAATATCCAGACCCA
GAAAAGAAAGTTGAATGGAGGAGTAATCTCTGGTATTTTGTATCTAAATTTACCAATTTT
GACGCTAAGCAGTTGTACAGACTGTATAAGTATGGCCTTAAGAAAACTGATGGAAAGAAG
GACAGTAAACACAAAGAAAATAAGTCCAATCTGAAGAACAATGTAAATAGTACAAATAAT
CACGTCAAAACTCATAAAAAGGAGGTGAAGCAAAACGATAGTGACCGTAGAGATAAAAGG
CCTAGACTCGAGAAGGAAAAAGTAGACAAAAATAATGAGAAAACACCTCATGTGTCGGGA
GTTAAGAGGAAACTCGAAGAGGGAGAATGTGATCCTGAGCCAACTGAAAATAAACGTCAT
GAGAGACATAAACACAAGCACAAGGATCGCAGAGATAGGGATGAAAGCGTGAAGAGGGAC
AATTTGATGTACAGAGAACGGAGCCGGACGGAGCGGGACCGAGAGCGGGATCGGGATCGA
GATCGGGACCGAGACCGGGATCGGGACCGCGACCGGGAGCGGGAGCGAGACCGGGACCGG
GAACGAGATCGGGACAGGGAGCGATCGAGGACGAGGCGGGACAGTGGAGGCGTGGGGCAA
CCTCGAGCGAGGCCGCCGTATGCGGCCCACCCGCACGCCGAGCATGCAGCTCATCCAGCG
CATCCCGCACATGCCGCGCATCCCGGCTGGACCCCGCCAGCGTATCCTGGCCCGCGGCAG
TATCGCGGAGGCGATCGCAATTCACGATCACACGACAAGAGACGGTTCGGAGGTTACGCA
GCTATGGGAGGTCCATACAGTGGTTACTATGAGGGCGCGGCGATGGCCAGCGGTATGGGT
TTCCCGCCGGTGCGCGCTTACTCGGACGACTGGCGCGGGTACGCGCAGCCCGAGTACCCG
TACGAGGACCGGGAGTATGAGCGCGAGGTTTACCGAAGAGATTACGACCGACGTGCGCCT
CCAACCTAG
Protein sequence:
MHLAGSMAESGSESISEKGGKSDSSGSGSGSDSDSGSSSSGSGSGGRSGSEKSSNGDRSH
LSDDTKGSPKHSNANSSKSDRHSDKDSSDDSITKRKSRNNHGKVKSDLWEDNPDIYGIRR
SARSRKEPDRLKVADSDSSDKGQSHSRKSRKRSDSWNSDTSDSDSDMKGSPPPPSKRPGQ
RSVPLRKKKPTRRRRFTSDEEESSEASDEDTKSRTATRRTGAAVSYKEASDEQTDSSDLC
GDAEAEPEPEPEDHSETIERVLGHRRGKKGVTGNVTTVYYIEENGDPNEDCNPDDEDSTE
PQYLIKWKGWSHIHNTWESEKSLNEQKVKGLKKLENYIKKEADLSWWRQQAGPEDIDYYE
CQSELQQELVKTYNNVERIIAEQTRELEGGGTAHEYFCKWESLPYADATWEDSSLIEKRW
PEKAENFKSREAAKTTPSRHCPVLKRRPKFHQVKEQPEYMGKDQTYVLRDYQMDGLNWLI
HSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFAQWA
PDINVVTYIGDVTSRDIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWACLLV
DEAHRLKNDDSLLYKALKEFETNHRLLVTGTPLQNSLKELWALLHFIMPYKFETWEEFEK
DHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKN
YSALRKGVKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKLL
LLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFN
AEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYR
LVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDATGTSANNPFNKEDLNAIL
KFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPSMAGDELLSAFKVASFAFDEDKAV
MEVKKEGGDEEAKDWDDIIPENVRKTIAEQEKNKEMEDLYLPPRRKNNQNNADSGGRKRR
GRSGGDAGDGGEAGDGDGDGDDSEASDGDGDASADDDRPRKRGRPPASHREKIKGFTDQE
IRRFVKSYKKFSAPLKHLDSIACDAELQEKPLADLKKLGEILQERCKAVLNNTADAPNEQ
SDGRKNARKTFKLGGVPVNAKTMAACQDELAPLDEFLPQTKEERLKWQLDFRTRPANFDV
EWGVEDDSKLLAGIYQYGMGSWEAIKMDSSFEICDKILTNEDKKPQAKHLQSRAEYLLKL
IKKLLDQKNGKQKQRKPRVKKGAKEPVTKDIVDDDVSTGEENKRTRSAKNDKNDKNKSKV
EEVLTHDETSNDRKEKDRKRTKKDGKDRLKNEKVKGRKKPAGPMHFTANNEPRALEVLGD
LDPSVFEECKEKMRPVKKALRALDNPDHTLSDTEQLSRTRACLTQIGNQIDICLSEYPDP
EKKVEWRSNLWYFVSKFTNFDAKQLYRLYKYGLKKTDGKKDSKHKENKSNLKNNVNSTNN
HVKTHKKEVKQNDSDRRDKRPRLEKEKVDKNNEKTPHVSGVKRKLEEGECDPEPTENKRH
ERHKHKHKDRRDRDESVKRDNLMYRERSRTERDRERDRDRDRDRDRDRDRDRERERDRDR
ERDRDRERSRTRRDSGGVGQPRARPPYAAHPHAEHAAHPAHPAHAAHPGWTPPAYPGPRQ
YRGGDRNSRSHDKRRFGGYAAMGGPYSGYYEGAAMASGMGFPPVRAYSDDWRGYAQPEYP
YEDREYEREVYRRDYDRRAPPT