New model in OGS2.0 | DPOGS203541  |
---|---|
Genomic Position | scaffold4271:- 9627-10280 |
See gene structure | |
CDS Length | 654 |
Paired RNAseq reads   | 438 |
Single RNAseq reads   | 1687 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA004341 (3e-43) |
Best Drosophila hit   | CG7675, isoform C (2e-31) |
Best Human hit | retinol dehydrogenase 14 (5e-33) |
Best NR hit (blastp)   | hypothetical protein TRIADDRAFT_28989 [Trichoplax adhaerens] (2e-40) |
Best NR hit (blastx)   | GF13192 [Drosophila ananassae] (3e-41) |
GeneOntology terms    | GO:0005488 binding GO:0005739 mitochondrion GO:0055114 oxidation reduction GO:0016491 oxidoreductase activity GO:0005783 endoplasmic reticulum |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR002347 Glucose/ribitol dehydrogenase IPR016040 NAD(P)-binding domain |
Orthology group | ND |
Nucleotide sequence:
ATGGACAGCGTCAGGGAGTTCGCAAAGAAATTCAACGAAGAGTTCGACCGTTTAGACCTT
CTGGTAAACAACGCTGGCATCGGAGCAGCGAAGAACGCGCTGACAGCTGACAATATAGAC
ATCCTGATGGCCATCAACTACGTGGGTCCGTTCCTCCTCACGCACTTACTACTAGATAAA
ATTAAAGCCACTAAAACAAGTAGAATCGTCATAGTGTCGTCATACCTCCACTTCCACGCC
AACTTTGAGCTGGACGACCTCACGAGGGTTACAACAAAAAATACATTGATCAAGTACTGT
AATGCAAAACTCTGCGATGTTCTGTGGACGAAGGAGCTCTCCAGAAGATTGCCAGCAGGT
GTAACGGTGAACGTACTCCATCCAGGTCTAGTGAAGACCAACATTTTTGATACCTTACAC
AAATGTTTAAAGAATCCGCTGTATGTTATTATCGATCTGCTTTTCAAAACGGCGAAAGAA
GGTGCACAGACTGTTATATACCTGTGTGTAGATCCAGCAGTCGAGAACATGACAGGAGGC
TACTACATGGACTGTAAGAAAATACCCTCGTCGAAACTATCGGAAGATGAAGACCTCGCG
AAAGCATTGTGGGACAAAACATTAGAGTTGGTTTGCGTCAAACCCGTCATATAA
Protein sequence:
MDSVREFAKKFNEEFDRLDLLVNNAGIGAAKNALTADNIDILMAINYVGPFLLTHLLLDK
IKATKTSRIVIVSSYLHFHANFELDDLTRVTTKNTLIKYCNAKLCDVLWTKELSRRLPAG
VTVNVLHPGLVKTNIFDTLHKCLKNPLYVIIDLLFKTAKEGAQTVIYLCVDPAVENMTGG
YYMDCKKIPSSKLSEDEDLAKALWDKTLELVCVKPVI