| New model in OGS2.0 | DPOGS205543 |
|---|---|
| Genomic Position | scaffold11021:+ 1563-2843 |
| See gene structure | |
| CDS Length | 1281 |
| Paired RNAseq reads | 261 |
| Single RNAseq reads | 794 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000092 (0.0) |
| Best Drosophila hit | Autophagy-specific gene 6 (6e-122) |
| Best Human hit | beclin-1 (1e-106) |
| Best NR hit (blastp) | autophagy related protein Atg6 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | autophagy related protein Atg6 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0048102 autophagic cell death GO:0035071 salivary gland cell autophagic cell death GO:0006914 autophagy |
| InterPro families | IPR007243 Autophagy-related protein 6 |
| Orthology group | MCL13935 |
Nucleotide sequence:
ATGAGTGATTCTAAATCGTTTGTGAATTTTTCATGCCAGAGATGTTTACAACCTTTGAAA
TTAGACGAATCTCTAAACAATCTTGGAGAGCACACGATTGCTGACTTGACGCTGCAAATT
CGGCGGAATAATGAAGCGGATCTTGATTTGCAATCATCTAGTTTGGACCATTATGTGCCA
CCGTTTCGTATGTCGGAATCAGGTAATGGGGCCAATGGATTCATGGTGATCTCAGACGGA
TGGGAGACGACATCCGTTGGTCATCAATTGCATGTGAAAGCCACATTATTTGATCTGCTC
TCTAATAACTCTGATGTAGATCATCCATTATGTGACGAATGCACTGACACATTATTAGAA
TTAATGGACAATCAATTAAGGCTCGCTGAGGCTGAGTGGAAGGATTATAACGATTATCTA
AAGAAATTGGAAGATGATAAAGAGGATTTGAACTTGGAAGGACTAGAGAAAGAGCTTGAA
GATTGGAAACAGGAGCAGAGCCGACTGCTACAGGAGCTATCAGCTTTACAAAAAGAGGAA
AAAGCCATGAAAGATGAGATAGATATACAAGAGAAAGAGAAGGATAGATTAGAAGTTGAA
CAGGAGATATATTGGAAAGAATACACAAGATTCCGTAAGGATTTGATGACAACGGAAGAT
CAAATAAAATTTTATGAATGTCAATTATCATACACTCAAACACAGCTAGACAAATTGAAG
AAAACAAATATATTCAAAGCTACATTTCACATATCGGATTCTGGACAGTTTGGTATTATA
AATAACTTTCGCCTCGGTCGGCTACCATCTGCACCGGTAGATTGGTCAGAAATCAATGCT
GCTTGGGGACAAACGGTGCTGCTTCTGTCGTCATTGGCTAGAAAGATCAATTTCTGTTTC
CAACGCTACAGACTAGTGCCTTATGGAAACCATTCTTATATTGAAGTATTGGAAGATCAG
AAAGTGTTACCGCTCTACGGCTCAGGCGGCTTCCGTTTTCTTTGGGATACAAAATTTGAT
GCGGCCATGGTAGCATTTTTAGATTGTGTCCAACAGTTTAAAGAACAAGTCGAGAAGGGG
AACACCGGTTTTTGCTTGCCTTACAGGATTGATAAGGGGAAAATCGAAGACACTGCCTCA
CCACCACATGCATATTCCATTAAAATCCAGTTCAACTCCGAGGAGCATTGGACGAAAGCT
CTGAAGTATATGTTGACTAACTTAAAATGGGGTCTAACTTGGATATCATCACAAATAAGC
GAGGACAATATTGAGAATTGA
Protein sequence:
MSDSKSFVNFSCQRCLQPLKLDESLNNLGEHTIADLTLQIRRNNEADLDLQSSSLDHYVP
PFRMSESGNGANGFMVISDGWETTSVGHQLHVKATLFDLLSNNSDVDHPLCDECTDTLLE
LMDNQLRLAEAEWKDYNDYLKKLEDDKEDLNLEGLEKELEDWKQEQSRLLQELSALQKEE
KAMKDEIDIQEKEKDRLEVEQEIYWKEYTRFRKDLMTTEDQIKFYECQLSYTQTQLDKLK
KTNIFKATFHISDSGQFGIINNFRLGRLPSAPVDWSEINAAWGQTVLLLSSLARKINFCF
QRYRLVPYGNHSYIEVLEDQKVLPLYGSGGFRFLWDTKFDAAMVAFLDCVQQFKEQVEKG
NTGFCLPYRIDKGKIEDTASPPHAYSIKIQFNSEEHWTKALKYMLTNLKWGLTWISSQIS
EDNIEN