| New model in OGS2.0 | DPOGS207595 |
|---|---|
| Genomic Position | scaffold150:- 110394-115677 |
| See gene structure | |
| CDS Length | 2805 |
| Paired RNAseq reads | 945 |
| Single RNAseq reads | 2515 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014074 (4e-23) |
| Best Drosophila hit | CG9667 (5e-48) |
| Best Human hit | pre-mRNA-splicing factor ISY1 homolog isoform 2 (1e-43) |
| Best NR hit (blastp) | pre-mRNA-splicing factor ISY1 homolog [Danio rerio] (3e-66) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012663 [Tribolium castaneum] (6e-59) |
| GeneOntology terms | GO:0071011 precatalytic spliceosome GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR009360 Isy1-like splicing |
| Orthology group | MCL13382 |
Nucleotide sequence:
ATGATTTTGTCTATTATTTCTTCAATCCCCAGAGCCAGAAACGCAGAAAAAGCGATGACA
ACATTAGCCAGATGGCGTGCTGCCCAAGTTCAAGAAGCTGGAGGGCAACGGGAGCGAAGG
CCCTATCTAGCATCTGAATGTAACAGTCTACAACAAGCAGAAAAATGGAGACTGCAAATA
GTGAGAGAAATTGCCAAAAAGGTGGCACAGATACAAAATGAAAAACCTCTTTTGATACAA
GAGTCCCCTAAGATTCAATCGCCTGTTATAAGTCCCATTCCGCAATCACCTCCTCTTACA
TTTACTTCATCTCTAAAAAAAGAATCACTTGATGCATCTATTAAAAGTCAAAGGAGTATC
ATGAAAGAATTGTCACAAGATATGGAAAGAAGAAGTAGGCAAGCATCTGATGCTTTATCA
AAGAATAGTAAAGTAAGCGAACCAACCAAAAGACGATCCTCCGCAAGTGACCAAATAAAT
GGACGAAGTTCCTCAATAAAAGGTTCAATCAATACATCAATTAGAAGTCAGAGAAGCCAA
ATTACAGATAATATTAAAGATAAGAACAGTAACAACAGTGAAGGTGGTATTCAAAAATCT
AATGTCAGTAATTTAAATAAAGAAAATACAGAAAAATCTGATTTTGAAGATCATTCAGAA
GGAGGTGAAGCTGACTCAAAACAAGACGGCAACCACAGTCCCGTGCTTTATACAAATATA
AATAAAATAGCCGATATGAGTAGACATCTTACTAATGAAGCTAACGCCTTAAGAAATTCA
ATTAGGACTTTATCCGAAGACATTGTGCGTACAAAAAAAGAATTAAGCATATCAAAAGAC
GAAAATGTCAACTTTCCTTATCACTTGTTCTTAATAGAACTCATCGTGAATAAGATTCAT
ATGAAGTGTGACTGTTTCGAGTTCAGTTACAATAATCTTGTTATTGCTGCAAGTTTCTTG
GGCAAGCAGCCCATAGTTCTGTATGACTCCTCTTATGGAAAAATCGATGATTTTAGCCAT
TTAAATGTAGGCAAATCTGCATTATTTGCGATGACTTATGATAAAATATGCAGTATTCAA
GACTTTATAATACATTTGAATTTGACGAAACAACCACCATGTTCTAGTTGTGTAATGAAA
GTAGCTGAAGCAAAAATCGACTGCACAAAAGAATTTTTGAATCTACGTGATGAATTGTGT
AAAAAGTGGACAGAAGAACAACCTAAAGATAACATAATATGTACAACATCAACTCCGCTA
AATAAAAATATGTGTTACTTGCGTAATGGTGACAGTGAAAACTGCGATTCGATAGGGGTC
ATGGAAGTAACAGTTCGAATGTCCTTCCTTGGGAAAGAGATTACAACAGCTTTCAGTGCT
TCATCGAAGCCCAAATGTACTTCAGTTCTAAATAAGGAAGACAATGGCATGAGCATGTAT
ACTTGTCACGACGTAGAAATGGATGGTCAGGGAAAAATTCTCTTAGATGAGGACACTTTG
ACAAGAAAAGAAATCCATAGAAGTACACATACCATGTCTTCTCGAAGAACTGGAAGTCCC
GTTTCGCAGTTATCAGGTGGTCATGCCTCACCCAAACAATTTTTGCCTACACAAAATTAT
ACGAACCCATACCGCCAAGACTATGGTCCACAATACAATGAAATTTTCACTAAAATGAAT
GAGAACGAGTTACGGATTAGAGTTCCGAAAACAACTAAGTTAGACAGGACGGCGAGGTAC
GACAGAATACAAGAATTGTGTTCGTGTGAAAACACTCCGTACAATACTGGAGACCAGATT
CAACTCGAGTTGCCCAAAGATAATGTTTACTCAAACGAATACGCTCACGAGACAAACACA
TCCCAAGTGAAATACGCATATAAAAGTTATGATAGAAATTTAGATAATAGAAATAGAAAA
ATTATTAACGTTACTCCACCAAATTGTAATATACCAGTAAATATGGAGAAACAGGTCCAT
CCAAGAAAAGACGTCTTTATACTTAAAATAGGAAAGAAACTTGAAACCAAAGACAAAAAA
ACTGATCTGGAAATAGAGCTCGTTACTCCTAAAGCACCAATAGAAAAAATCTTTAATAAT
AATGATATTTCTCAGCAATGTAGCTGTAATGATATGAAACACAAGCCACTAAAGAATGAA
ATCAAAGAACATACAAAGAAAGGAAAGAAAACTGGTCTTGGAGAATTTCGAATTCGCGAC
CTGAACGACGAAATCAACAAACTTATGAGAGAGAAACGACACTGGGAGGTACAAATTAAA
TCTCTCGGAGGTCCTGATCATGCTCGAGTCGGTCCAAGGATGTTGGACCAAGACGGTAAA
GAGGTGCCGGGTAATAGAGGGTACAAATATTTTGGAGCTGCAAAAGACTTGCCAGGTGTC
CGCGAGTTGTTCGAGCAGGAGCCGCCGGCGGCGCCGCGCCGGACACGAGCTGACCTCATG
AGGGACGTGGATGCTGATTACTACGGGTACAGAGACGACGAGGACGGACTACTGCTGCCG
CTTGAGAGAGAAGCAGAGATAGATGCTATAGCCAGGGCAGTTGATGAATGGAAGAGAAAT
AAAGACGAGACAAGAGATCAAGACATTCCAGAGGAAGAAAATATTTACCCAGAAGATCCT
GAAGATAAGAGAATAATAGATGAAGACGAGGACGGAAAACCCGCGGTGACGTCACACGTT
GCAGTCCCCTCCCAGAAGGATGTAGAAGAAGCACTTTTAAAACGGAAGAAGCAAGAACTA
CTAGAAAGATATGGTTGTTTAGATGTTAAGATGGAGGGCAGCTAA
Protein sequence:
MILSIISSIPRARNAEKAMTTLARWRAAQVQEAGGQRERRPYLASECNSLQQAEKWRLQI
VREIAKKVAQIQNEKPLLIQESPKIQSPVISPIPQSPPLTFTSSLKKESLDASIKSQRSI
MKELSQDMERRSRQASDALSKNSKVSEPTKRRSSASDQINGRSSSIKGSINTSIRSQRSQ
ITDNIKDKNSNNSEGGIQKSNVSNLNKENTEKSDFEDHSEGGEADSKQDGNHSPVLYTNI
NKIADMSRHLTNEANALRNSIRTLSEDIVRTKKELSISKDENVNFPYHLFLIELIVNKIH
MKCDCFEFSYNNLVIAASFLGKQPIVLYDSSYGKIDDFSHLNVGKSALFAMTYDKICSIQ
DFIIHLNLTKQPPCSSCVMKVAEAKIDCTKEFLNLRDELCKKWTEEQPKDNIICTTSTPL
NKNMCYLRNGDSENCDSIGVMEVTVRMSFLGKEITTAFSASSKPKCTSVLNKEDNGMSMY
TCHDVEMDGQGKILLDEDTLTRKEIHRSTHTMSSRRTGSPVSQLSGGHASPKQFLPTQNY
TNPYRQDYGPQYNEIFTKMNENELRIRVPKTTKLDRTARYDRIQELCSCENTPYNTGDQI
QLELPKDNVYSNEYAHETNTSQVKYAYKSYDRNLDNRNRKIINVTPPNCNIPVNMEKQVH
PRKDVFILKIGKKLETKDKKTDLEIELVTPKAPIEKIFNNNDISQQCSCNDMKHKPLKNE
IKEHTKKGKKTGLGEFRIRDLNDEINKLMREKRHWEVQIKSLGGPDHARVGPRMLDQDGK
EVPGNRGYKYFGAAKDLPGVRELFEQEPPAAPRRTRADLMRDVDADYYGYRDDEDGLLLP
LEREAEIDAIARAVDEWKRNKDETRDQDIPEEENIYPEDPEDKRIIDEDEDGKPAVTSHV
AVPSQKDVEEALLKRKKQELLERYGCLDVKMEGS