New model in OGS2.0 | DPOGS207598  |
---|---|
Genomic Position | scaffold150:- 70041-71172 |
See gene structure | |
CDS Length | 792 |
Paired RNAseq reads   | 307 |
Single RNAseq reads   | 885 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009983 (6e-124) |
Best Drosophila hit   | CG11583 (5e-92) |
Best Human hit | ribosome biogenesis protein BRX1 homolog (1e-82) |
Best NR hit (blastp)   | PREDICTED: similar to brix domain-containing protein 2 [Tribolium castaneum] (5e-113) |
Best NR hit (blastx)   | PREDICTED: similar to brix domain-containing protein 2 [Tribolium castaneum] (6e-111) |
GeneOntology terms    | GO:0003674 molecular_function GO:0042273 ribosomal large subunit biogenesis GO:0005730 nucleolus |
InterPro families    | IPR007109 Brix domain IPR004154 Anticodon-binding |
Orthology group | MCL12089 |
Nucleotide sequence:
ATGGCGAAATTAAAAATAAAGAAGACTAAAAAACAAATCAAACAAGCTCCTGAAAAACCC
AAAGAAGAAAATGAAGTCGTGCTACCTGCCGTCCGATCTTCTGATGAGCCAACTTCTAGA
CAGGCAAAATGGATTAATAGGCAAAGGGTTTTAGTATTCGCTGCACGTAGTATAAATCAT
CGTCATCGGCATTTAATGGAGGATTTAAAAAAACTGATGCCGCACCATAAAACCGAATCT
AAAATGGAAAGAAGTAAGAACTTATATGTGGTGAATGAGATCAGTGAAATGAAAAACTGC
AACAAATGCATACTTTTTGAAGGGAGAAAAATGAGGGATTTATATGTATGGTTTTCCAAT
ATTCCTAATGGACCTAGTGCAAAATTTTTGGTTGAAAACATTTACACTATGGGAGAGCTT
AAAATGACAGGCAACTGCTTAAGAGGCTCTAGGCCATTGTTATCTTTTGACCCACAGTTC
ACAAAAGACCCCCATTATAGTCTTTTAAAGGAACTCTTAACACAAATATTTGGAGTTCCA
AAACATCATCCCAAAAGTCAACCATTCTTTGATCATGTTTATACATTCATGATTCTTGAC
AACCGCATTTGGTTTAGAAATTACCAAATACTTTCTGAAGATGGAGCTTTAGCTGAAATT
GGACCCCGATTTGTACTCAATCCAACAAAGATATTTTCTGGATCATTTGGAGGTACAACA
TTATGGGAGAACCCTAAATATGTAAGTCCAGCAAAACTGCGACAAGCATATTCAAAGAAA
GCTGCAAACTAG
Protein sequence:
MAKLKIKKTKKQIKQAPEKPKEENEVVLPAVRSSDEPTSRQAKWINRQRVLVFAARSINH
RHRHLMEDLKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYVWFSN
IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYSLLKELLTQIFGVP
KHHPKSQPFFDHVYTFMILDNRIWFRNYQILSEDGALAEIGPRFVLNPTKIFSGSFGGTT
LWENPKYVSPAKLRQAYSKKAAN