New model in OGS2.0 | DPOGS207931  |
---|---|
Genomic Position | scaffold45:+ 65786-67409 |
See gene structure | |
CDS Length | 1056 |
Paired RNAseq reads   | 339 |
Single RNAseq reads   | 833 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000320 (7e-138) |
Best Drosophila hit   | zinc finger protein RP-8 (4e-67) |
Best Human hit | programmed cell death protein 2 isoform 1 (1e-62) |
Best NR hit (blastp)   | pcdc2/rp-8 (programmed cell death protein 2) [Aedes aegypti] (2e-83) |
Best NR hit (blastx)   | pcdc2/rp-8 (programmed cell death protein 2) [Aedes aegypti] (1e-85) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0008270 zinc ion binding GO:0046872 metal ion binding |
InterPro families    | IPR002893 Zinc finger, MYND-type IPR007320 Programmed cell death protein 2, C-terminal |
Orthology group | MCL13610 |
Nucleotide sequence:
ATGACCAATAAGGCTATTGATATTGGATTTTTAGAAGAAAAATCAAATTGGTTATTGCAT
CCAAGATTCTTTCCCAGTAAAGTTGGTGGAAAACCTGCTTGGTTAGATTTAAAAAACCTC
CCTAGTCCATCAGAATTAGTGTGCAAAAGATGCAATGATCCTTTAATATTTTTATGTCAA
GTATACAGCCCTTATGAAGAGAAGGATGAATGTTTTCATCGCACAATTTTTATTTTTATT
TGTAAAAAGGGTTCATGTTGTCAAGTAAACGATTCTGACAACTTTCTGGTATTACGATGT
CAGATACCTCGCAGAAATGATTATTATTCATTTGAACCATATGAAGAAAATGAAAATGAG
ACCTTCCCAATGGACAAATGGCCTAAATTATGTTACATTTGTGGTGCGAGAGCACCATCT
CACTGCTCAAAATGCAAGAAAGTCTATTATTGCAGTCGTCAACATCAAATTCTAGATTGG
AAAAATCACAAAATAGAGTGTCCAAACCTACAGCAAACAGATCCACCTAATAGTAACTTT
GTTGTGACTGAAGGAGCAAAATCTTTACTTTTTAAAGAATGGGAGCTCATTGTTGATGAA
GAAGATGAGGAAGATCCCACAAATGTTGACACAAATCAGGAGATGGAAAAGCTAAGGAAA
ATGATAGAAGAGAAAAAAGCTGGAACAATGGAGAATTTAAGTGAAAAAGAATTAGAACAA
TATACAGGTAGTGTGCCGGAGGATAAGGTTTTTAATAAATTTAGCAAAAGAATAGCTCGG
CATCCCGATCAAGTGTTGAGGTATGATAGAGCTGGAATACCGTTGTGGATAACCATGAAT
TCTGGAAATCTTCCTATACCTAACTGTAAATACTGTAATGGAGAAAGGCATTTTGAGTTT
CAAATAATGCCACAACTACTAAACTTCATAAATGTTGGAATTGAATTCAACAGTATTGAC
TGGGGTGTATTAGCTGTTTATACTTGCAGGGAGAGTTGTAATGAGGGCCCAGCATATAAA
GAGGAATTTTTAATCAAACAGGACTTAACAACTTAG
Protein sequence:
MTNKAIDIGFLEEKSNWLLHPRFFPSKVGGKPAWLDLKNLPSPSELVCKRCNDPLIFLCQ
VYSPYEEKDECFHRTIFIFICKKGSCCQVNDSDNFLVLRCQIPRRNDYYSFEPYEENENE
TFPMDKWPKLCYICGARAPSHCSKCKKVYYCSRQHQILDWKNHKIECPNLQQTDPPNSNF
VVTEGAKSLLFKEWELIVDEEDEEDPTNVDTNQEMEKLRKMIEEKKAGTMENLSEKELEQ
YTGSVPEDKVFNKFSKRIARHPDQVLRYDRAGIPLWITMNSGNLPIPNCKYCNGERHFEF
QIMPQLLNFINVGIEFNSIDWGVLAVYTCRESCNEGPAYKEEFLIKQDLTT