| New model in OGS2.0 | DPOGS207932 |
|---|---|
| Genomic Position | scaffold45:+ 69059-70252 |
| See gene structure | |
| CDS Length | 1101 |
| Paired RNAseq reads | 182 |
| Single RNAseq reads | 504 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000375 (5e-69) |
| Best Drosophila hit | CG10495 (4e-75) |
| Best Human hit | tRNA-dihydrouridine synthase 4-like (8e-71) |
| Best NR hit (blastp) | tRNA-dihydrouridine synthase [Aedes aegypti] (8e-99) |
| Best NR hit (blastx) | tRNA-dihydrouridine synthase [Aedes aegypti] (4e-94) |
| GeneOntology terms | GO:0055114 oxidation reduction GO:0050660 FAD binding GO:0008033 tRNA processing GO:0017150 tRNA dihydrouridine synthase activity |
| InterPro families | IPR013785 Aldolase-type TIM barrel IPR018517 tRNA-dihydrouridine synthase, conserved site IPR001269 tRNA-dihydrouridine synthase |
| Orthology group | MCL13735 |
Nucleotide sequence:
ATGGTTAGATATAGTAAAGTTCAATTCAGGACTTTAGTCAAAAATTATGGGGTCGACTTG
TGTTTTACTCCCATGATATTAGCTGATTCATTTTGCCAAAACGAGAAAGCTAGGTCAAAT
GAATTCATAACAACTACAAATGATACTCCTTTAATTGTGCAGTTTGCTGCTAATAATGTA
GATGATTTTGTAGATGCATCTCAGTTAGTTTATCCATATGCTGATGGTGTTGACTTAAAT
TGTGGTTGTCCTCAGAGATGGGCCATGAAGGATGGCTATGGGTGTGCTTTGCTCTCTAGA
CCAGAGTTAGTTCATAATTTATTAAGAAGTGTGAGAAATAATTTGCCAAGCCATTTTAGT
GTGTCAGTCAAAGTACGAATATTTCAGGATTTAAAAAAAACTATTACCATGTGTCAGCAG
TTGGAACAGTGTGGAGTTAATTTCATGACAGTACATGGAAGGACTCCACTACAGAAAAGT
GGGGATAATATTGATGTTGAAATGTTAAAGGAGGTTTGTGATTTGGTTAAAATACCAGTT
GTTGCAAATGGTGGCATAAAATCATTATATGATGCAGAACAGTTATACAGCACATTGAAT
TGTGATGGAATTATGGTAGCCGACGGTATTCTAAATAATCCAGCTTTATTTACAGGGGCC
AATAAAACCCCTCTTTACTGTGTGAAACATTGGATGAACCTAAAAGACTCAAGTGATGAC
AAAATAACATTCCAATGTTACCATCATCATTTAGTTTTCATGCTAGGAAAAATACTGACA
AAGAAACAAAAGCAAGAGTTTAACAACCTTAGTGATTTCGATGAGGTTGATGTCTACATA
AAAAAATATGTTTTAGATTCATTTGACGGAGATGTAGAAGTGAATCATGAATTAGAAAAT
TTTGTGGACTGTGAATTTAATAGTAAAATTACATTGAAACATGCTCACAAATGTAGGGGA
TGTGGCAAAAGCATTTGCTATTGTATATGTGCGCAATATGATTATGATTCTAATAAGGGC
AATTACTTTAAATCATTTGTAACTAACAACGATGGTATTGATTTTATGGACAGTAACATG
TTTGATGAATGTAACCTTTAG
Protein sequence:
MVRYSKVQFRTLVKNYGVDLCFTPMILADSFCQNEKARSNEFITTTNDTPLIVQFAANNV
DDFVDASQLVYPYADGVDLNCGCPQRWAMKDGYGCALLSRPELVHNLLRSVRNNLPSHFS
VSVKVRIFQDLKKTITMCQQLEQCGVNFMTVHGRTPLQKSGDNIDVEMLKEVCDLVKIPV
VANGGIKSLYDAEQLYSTLNCDGIMVADGILNNPALFTGANKTPLYCVKHWMNLKDSSDD
KITFQCYHHHLVFMLGKILTKKQKQEFNNLSDFDEVDVYIKKYVLDSFDGDVEVNHELEN
FVDCEFNSKITLKHAHKCRGCGKSICYCICAQYDYDSNKGNYFKSFVTNNDGIDFMDSNM
FDECNL