DPGLEAN16662 in OGS1.0

New model in OGS2.0DPOGS207936 
Genomic Positionscaffold45:+ 132405-140586
See gene structure
CDS Length540
Paired RNAseq reads  149
Single RNAseq reads  393
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA000377 (5e-64)
Best Drosophila hit  lin-28 (5e-44)
Best Human hitprotein lin-28 homolog B (5e-31)
Best NR hit (blastp)  hypothetical protein TcasGA2_TC014742 [Tribolium castaneum] (3e-68)
Best NR hit (blastx)  hypothetical protein TcasGA2_TC014742 [Tribolium castaneum] (2e-68)
GeneOntology terms



  
GO:0003677 DNA binding
GO:0006355 regulation of transcription, DNA-dependent
GO:0008270 zinc ion binding
GO:0005737 cytoplasm
GO:0001708 cell fate specification
InterPro families




  
IPR016027 Nucleic acid-binding, OB-fold-like
IPR002059 Cold-shock protein, DNA-binding
IPR011129 Cold shock protein
IPR001878 Zinc finger, CCHC-type
IPR012340 Nucleic acid-binding, OB-fold
IPR013084 Zinc finger, CCHC retroviral-type
Orthology groupMCL17001

Nucleotide sequence:

ATGAGCGGGAGGGAGGGCGGAAATGCAGTTCCGTCTTCGAGTGCGGGCGGCATCGCTGGC
GTAACGGGCGTGCCGCGGCGTGGTCGATGCAAGTGGTTCAACGTCGCAAAAGGATGGGGT
TTCATCACCCCTGATGATGGAGGCCAGGACGTTTTTGTTCACCAGAGTGTGATTCAAATG
ACGGGCTTCAGATCGCTGGGTGATGAAGAGGTGGTTGAATTCGAGTGCAAGGAGTCTGAC
AAGGGTTTGGAAGCTACGCGCGTTTGTGGACCATCCTCAGTCGACTGTCAGGGCTCTCAC
AGACGTCCGCTGAGTAAGAAGCGGTTTAGGAAGATACGCTGCTACAACTGTGGTGAGTTT
GCAAACCACATAGCTGCTAAGTGCAGTATAGGGCCACAACCAAAGAGATGCCACAATTGC
AAGAGCGAAGACCACCTCATTGCTGACTGTCCTATAAAGGTCGACAAGAAAAAGGACGAC
TCACAATCGAAGAACTCAGGCAGTTCCCAGGGGAGTCTGCAAGAGAGCCCGCAGCCGTAA

Protein sequence:

MSGREGGNAVPSSSAGGIAGVTGVPRRGRCKWFNVAKGWGFITPDDGGQDVFVHQSVIQM
TGFRSLGDEEVVEFECKESDKGLEATRVCGPSSVDCQGSHRRPLSKKRFRKIRCYNCGEF
ANHIAAKCSIGPQPKRCHNCKSEDHLIADCPIKVDKKKDDSQSKNSGSSQGSLQESPQP