| New model in OGS2.0 | DPOGS209320 |
|---|---|
| Genomic Position | scaffold309:- 67357-69048 |
| See gene structure | |
| CDS Length | 1152 |
| Paired RNAseq reads | 2302 |
| Single RNAseq reads | 5596 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013756 (3e-122) |
| Best Drosophila hit | chitin deacetylase-like 9 (1e-88) |
| Best Human hit | ND |
| Best NR hit (blastp) | chitin deacetylase 1 [Mamestra configurata] (9e-137) |
| Best NR hit (blastx) | chitin binding PM protein [Helicoverpa armigera] (7e-140) |
| GeneOntology terms | GO:0005975 carbohydrate metabolic process GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
| InterPro families | IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel IPR002509 Polysaccharide deacetylase |
| Orthology group | MCL18657 |
Nucleotide sequence:
ATGAGGTGCACTTCAGTTTTATTAGGTTTGGTCCTTTTTGTGTCCGTTCATTGTCAGAAC
GATAGTCTTCCCGCGGCGGAAAAGTGTGATCCGGAGAAATGCAAGTTGCCAAACTGTAGA
TGCTCGTCCACTGAAATCCCTGGAAACTTGGAAGCCCGCGATACACCACAGTTCGTTATA
CTCACATTCGATGACGCAGTGACCACAGTGAACATCGAGACCTATCGCAGTATCCTCTAC
AATAGAGCCAACTCGAACAGGTGTCCCATCGGAGTGACATTCTTCATCAACCATGAGTAC
ACAGATTACAGCATTGTTAACGAGTTATACAACCGGGGCTTTGAAATTGCTCTTCATTCG
ATCACTCACAAAACTAATCAAACATACTGGAAAGAAGCCACCGTTGAAGAATCCACCAGA
GAATTCGTAGATCAGAGAATTCTCGTGTCTCATTTTGCAAATATTCCCCAAAGATCTATC
CAAGGGATTCGCAGTCCTTTCCTTCAGTTGTCCGGCAACAGTACCTATCAAATGATAAAA
GAGAACGGTTTGACTTACGACTTGAGTTGGCCGACTGTCAGGTTTACTGATCCCGGTCTC
TGGCCCTACACTCTCGACTACGCTTCAATCCAGGATTGCGTCATCGCCCCTTGCCCTACA
GCGTCTGTTCCCGGTGTTTGGGTCATTCCCATGATCTCCTGGACTGATCTGGAGGGTTTC
CCTTGCTCTTTTGTTGATGCCTGTTTTTCCAATCCTAACTTAAGCGACGAAGATGCTTGG
TTCCAATACATCGTCAAAGCATTCGAGAAGCACTACCTCGGCAATCGTTCTCCTTTCGGA
TTCTATGTCCACGAATGGTTCGTTAGGATCAATCCGGGAGTTAAAGGCGCTCTGGTCCGC
TTTATGAATATGGTCCAAAATATGAACGACGCATTTTTGGTGAACGCTAATGAGGTAGTC
AACTGGGTAAAGAACCCGGTACCACTGAATGAGTTTGTAAAACAGGATTGTCCCCGCTTC
GTCCCTGCTGCCTGTCGTCGGACGACCTGCTCCGCTCTGAAAGAGGAGGAAAGTGGCAAT
ACTTATTACATGACAATCTGCAACAGATGTCCCCGAGTCTATCCTTGGCTTAACAATCCT
CGTGGCGTCTAG
Protein sequence:
MRCTSVLLGLVLFVSVHCQNDSLPAAEKCDPEKCKLPNCRCSSTEIPGNLEARDTPQFVI
LTFDDAVTTVNIETYRSILYNRANSNRCPIGVTFFINHEYTDYSIVNELYNRGFEIALHS
ITHKTNQTYWKEATVEESTREFVDQRILVSHFANIPQRSIQGIRSPFLQLSGNSTYQMIK
ENGLTYDLSWPTVRFTDPGLWPYTLDYASIQDCVIAPCPTASVPGVWVIPMISWTDLEGF
PCSFVDACFSNPNLSDEDAWFQYIVKAFEKHYLGNRSPFGFYVHEWFVRINPGVKGALVR
FMNMVQNMNDAFLVNANEVVNWVKNPVPLNEFVKQDCPRFVPAACRRTTCSALKEEESGN
TYYMTICNRCPRVYPWLNNPRGV