New model in OGS2.0 | DPOGS200256  |
---|---|
Genomic Position | scaffold4828:+ 2016-2444 |
See gene structure | |
CDS Length | 192 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 344 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000017 (8e-12) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | cecropin-D precursor [Agrius convolvuli] (1e-15) |
Best NR hit (blastx)   | cecropin-D precursor [Agrius convolvuli] (3e-15) |
GeneOntology terms    | GO:0005615 extracellular space GO:0045087 innate immune response GO:0050829 defense response to Gram-negative bacterium GO:0050830 defense response to Gram-positive bacterium GO:0050832 defense response to fungus |
InterPro families   | IPR000875 Cecropin |
Orthology group | MCL10014 |
Nucleotide sequence:
ATGAAGTTCTTTAATCTTTTCACCTTCGTTTTCGCTTATTTTATGGCGTTCGGCTTAGCA
ACCGCTGCTCCATGGAATCCTTTCAAGGAATTGGAAAAAGCTGGTCAGAGAGTCCGAGAC
GCTATAATATCCGCGGCCCCAGCTGTCGAAGTTGTTGGTCAGGCATCAAGCATATTAAAA
GGAAAGAATTAA
Protein sequence:
MKFFNLFTFVFAYFMAFGLATAAPWNPFKELEKAGQRVRDAIISAAPAVEVVGQASSILK
GKN