New model in OGS2.0 | DPOGS205190  |
---|---|
Genomic Position | scaffold1389:- 67286-71366 |
See gene structure | |
CDS Length | 1638 |
Paired RNAseq reads   | 357 |
Single RNAseq reads   | 864 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008755 (4e-144) |
Best Drosophila hit   | meiotic central spindle (3e-25) |
Best Human hit | zinc finger protein 208 (8e-31) |
Best NR hit (blastp)   | hypothetical protein BRAFLDRAFT_277393 [Branchiostoma floridae] (2e-32) |
Best NR hit (blastx)   | hypothetical protein BRAFLDRAFT_277393 [Branchiostoma floridae] (7e-39) |
GeneOntology terms    | GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0008150 biological_process |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | ND |
Nucleotide sequence:
ATGTACATTATTACAAGAAAGGGCCCTCTTTACGACCCGGGGTTGTGTAGATGTTGCGGT
GCAATAAAGAAATGTCGCTTACTGAATGTGGAATACGAATGGCAGGGTCGAAAAGAAATT
TATTCCGATTTATTTGTGGATTGTTTTGGACTATTGCTATCACATCTAGATGGAGAGGCG
AAGGAGCGTCTGATCTGCGCCACCTGTGTCTCCCGGCTCAGAGAGGCGAGTACATTTCGG
CAACAGGTGCTACAATGTGAAGAAATTCTGTTACGAACCAAGATACAAAGTGAAGGTGAT
AGTGACTTGGATTGCGTAAAAATTGAAGCTGAAATTAAGACGGAATGCCTGATGACCTCT
AATGAAGATAGCAACGATCATAATGACGTCATAGATGATATTAAGCCTGAAAATAAAAAA
AGAAAGTCCGTGAGGCAGAAGTTGAAGAAGAGAAGAAAGGAGGACGATCGAGACGTGAGG
GAAGAAGATCTATACAATAGCAGAAGAATCAGCGAGAGACTGAAAGAGCTCGTAAATGTC
GATCTGGCTGAAAAATCAACGCAAGCCCACAACGGTTACAAATTGGACAATTCTACGCCG
TACGCTAATATCGTCACGATAGTCGAAAACTCCTACGCGTGTCCCTTCGAGACGTCCTTC
AGCGATTACTTCTGTGTCTATTGCAGACATCTATTCACTGACCCAAACAAACTAAGAGAA
CATACCCTCAATCACGATCCGCTGACCTTCAAGGAGGTCCTCTCAAACAGCGCCAACAAC
AAGAAAGTCCAAATAGACATGTTCCGAATAGACTGCAGGTTGTGCCCACAGGTTATAAAT
GATTTCGAAACGCTGAGAGATCATTTGAACAGCTCGCATCAGATAAAATTGAATCTAGTG
TCGAACGAGTTCCTTAAATTTAGACTGACTTCCGGTTCGATTGCGTGCACGGAGTGCGGC
ACCAGCTTCAGCTTCTTCCACGCCTTGAAGAAGCACATGGCGGAGCACTTCGGGACGTGC
ATATGCGATGTATGCGGCGCGCATTACTTCGAAGAGCGCATGCTAGTGTTGCACCAGAAA
ACCCACCAAAAGAACGAGGAGTGCTTCACTTGCAAGGAGTGCGGGAAGAATTTCAAGTCC
AAATACTCGAGATACATCCACATAGCGAGGCTCCACAAGAAGGAAGCGGCTTACCAGTGC
AGCAAGTGCGATGAAGTGTTCTTCTCGTACAGCTTGAGATACCGGCACATGATAGACGTC
CACGGCGAGGAGAGGACCTTCCAATGCGAGCAATGCGACCGAGCTTACGACAGCAGGAAG
TCCTTGCGGGAGCACAACAGACGTTTCCATCTCAAAATCCTCAAACATCAGTGCGAGTTG
TGCGACAAAAGATTCTATCTGCCGTCGAGACTGAAAGAGCACATGGCCAGCCACACCGGA
GAGAGGAACTTCCGCTGCGAGTACTGCGGGAAGAGCTACCCGAGGCTGCGAGGTCTGAAG
GTCCACATGCAGTCGCACAGCAGCGACAAGAAATTCAAATGCGTTATGTGCGAGGCGTCC
TTCACCCAGAACGTGAATCTGAAAAATCATATCAAGAGACAGCACCAAAGCCTGGAATTA
GACGATTACAACGACTGA
Protein sequence:
MYIITRKGPLYDPGLCRCCGAIKKCRLLNVEYEWQGRKEIYSDLFVDCFGLLLSHLDGEA
KERLICATCVSRLREASTFRQQVLQCEEILLRTKIQSEGDSDLDCVKIEAEIKTECLMTS
NEDSNDHNDVIDDIKPENKKRKSVRQKLKKRRKEDDRDVREEDLYNSRRISERLKELVNV
DLAEKSTQAHNGYKLDNSTPYANIVTIVENSYACPFETSFSDYFCVYCRHLFTDPNKLRE
HTLNHDPLTFKEVLSNSANNKKVQIDMFRIDCRLCPQVINDFETLRDHLNSSHQIKLNLV
SNEFLKFRLTSGSIACTECGTSFSFFHALKKHMAEHFGTCICDVCGAHYFEERMLVLHQK
THQKNEECFTCKECGKNFKSKYSRYIHIARLHKKEAAYQCSKCDEVFFSYSLRYRHMIDV
HGEERTFQCEQCDRAYDSRKSLREHNRRFHLKILKHQCELCDKRFYLPSRLKEHMASHTG
ERNFRCEYCGKSYPRLRGLKVHMQSHSSDKKFKCVMCEASFTQNVNLKNHIKRQHQSLEL
DDYND