New model in OGS2.0 | DPOGS205191  |
---|---|
Genomic Position | scaffold1389:- 61006-65694 |
See gene structure | |
CDS Length | 1641 |
Paired RNAseq reads   | 239 |
Single RNAseq reads   | 579 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008758 (0.0) |
Best Drosophila hit   | CG12299 (8e-23) |
Best Human hit | zinc finger protein 1 homolog (9e-25) |
Best NR hit (blastp)   | PREDICTED: zinc finger protein 45-like [Danio rerio] (2e-29) |
Best NR hit (blastx)   | PREDICTED: zinc finger protein 45-like [Danio rerio] (2e-35) |
GeneOntology terms    | GO:0005622 intracellular GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0008150 biological_process |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL40324 |
Nucleotide sequence:
ATGAACGGTATTAAAGGTAAGGGACCTGTGTTCGACCCGGGTCTCTGCAGATGTTGCGGT
GCCATCAAAAAGTGCAGACTTTTAAATTACGAGTACGAAAGCTTTGGAAATAAAGAAATA
TATTCTGACATGATCATGGATTGTTACGGACTCGTCCTGTCTCATTTAGACGGGAAGCAG
ACTGAGAGGCTGGTGTGTGCGTCTTGTGTCCACCGTCTAAGGGACGCTATGGCATTCAGA
CAGCAAGTGCTGAAATGCGAAGAGGCATTCCTCCAGGTCAAGATATACGACGAAAAAGAG
AATCACGCGGAAGAACAGAAAATCGAGGTGGAAGTCAAGCTTGAACCGGAAGAGATCAGC
AACGAGACCGAGATGGCCAAAGACGCGCTAGCAGACGAGTCGCAGACTGACAACGAAATT
AAACCGGATATGGCAATAAATGCACCAAACGAGGACATTCCGCTACAGGAAATAGTGACG
GAGGATGAGGACAACAAATTAGATAAGATCAACGTAGAAGCTTTGCCTAAAAGATTTAAA
ACCATGAAGAGATTGTCAGCGGAGAGAAGCAAAATCCCAATGTCGAAACTTCAGCAACGG
ATGAGGGAGCGGGACCCCACGTATATAACTGAGACGAACATACTCACAATCGTTGAGTTT
TCCTACGCGTGTCCATTCAAATGCCGCCACAACCACCTGCTGTGCTTCTACTGCGGTCAG
AACTTCTCCGACCCGCAGCAGCTCAGGGACCACACATCGCAGTTCCACCATCCAAGGAAA
TTCAAAATAACGGACCACAAAAACATGCTCAAGTTGGACCTCACCCGGATAGACTGCAGG
CTCTGCGGCCACAAGACGGACGACCTCGACGATTTCAAAACCCACGTGACCGATGTCCAC
AAAAAGAAATATTACTTCAACGTCAAAGATCTGATGCTGCCATTCAAGTTGTCCAAGGAC
GAGTTCAAGTGCGCGCTCTGTGACGTCATCTTCCCCTACTTCCACGCTCTCAACAAGCAC
ATGAACGAGCACTTCAGCAACTACGTCTGCGAAACCTGCGGGCTCGGGTTTGTGGACCGC
GGGAGGTTCCTGATGCATCAGCAGCGGCACGAAGAGGGCGACTTCCCGTGCGAAGTCTGC
GGGAAGGTTTTCAAAGCCCAGTACAATAAAGAACTGCATATTGATCGAGTTCACAAAAAG
AAAGGTCGTGTGTATTGCCCGAAATGCGACGTGAGGTTAATGAACTACCCACAAAAACTG
AAACACCTGGTCGAAGTCCACGGCGAGGAGCCCCTGTCCTTCAGCTGTAACATGTGCGAC
AAAGTCTGCGAGACGCGAAGAAAGCTGACAATACACAGACGGAAAGAACATTTGAAAGAT
TACAGATACGAATGCCAGTGTTGCGGGCAGAAATTTTTCACACGTTTCGCCCTGACCAAC
CACATGCCGACACACACAGGCGAGAGGAACTTTAAGTGCAAGGTCTGCGAGAAGACCTAC
CCTCGCCTGAAAACATTGAAAGACCACCTCCGCATCCACACCAACGACAGGAGATACAGA
TGCCACATATGCGGACAGGCCTTCATACAGAACTGCAGCCTCAAAGGGCACATGAAGAGC
CAGCATCCCGAATATAGCTAG
Protein sequence:
MNGIKGKGPVFDPGLCRCCGAIKKCRLLNYEYESFGNKEIYSDMIMDCYGLVLSHLDGKQ
TERLVCASCVHRLRDAMAFRQQVLKCEEAFLQVKIYDEKENHAEEQKIEVEVKLEPEEIS
NETEMAKDALADESQTDNEIKPDMAINAPNEDIPLQEIVTEDEDNKLDKINVEALPKRFK
TMKRLSAERSKIPMSKLQQRMRERDPTYITETNILTIVEFSYACPFKCRHNHLLCFYCGQ
NFSDPQQLRDHTSQFHHPRKFKITDHKNMLKLDLTRIDCRLCGHKTDDLDDFKTHVTDVH
KKKYYFNVKDLMLPFKLSKDEFKCALCDVIFPYFHALNKHMNEHFSNYVCETCGLGFVDR
GRFLMHQQRHEEGDFPCEVCGKVFKAQYNKELHIDRVHKKKGRVYCPKCDVRLMNYPQKL
KHLVEVHGEEPLSFSCNMCDKVCETRRKLTIHRRKEHLKDYRYECQCCGQKFFTRFALTN
HMPTHTGERNFKCKVCEKTYPRLKTLKDHLRIHTNDRRYRCHICGQAFIQNCSLKGHMKS
QHPEYS