| Genomic Position | scaffold1389:+ 49335-53608 |
|---|---|
| See gene structure | |
| CDS Length | 1758 |
| Paired RNAseq reads | 425 |
| Single RNAseq reads | 975 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008782 (0.0) |
| Best Drosophila hit | CG12299 (3e-27) |
| Best Human hit | PREDICTED: zinc finger protein 208 (1e-28) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_87563 [Branchiostoma floridae] (1e-31) |
| Best NR hit (blastx) | hypothetical protein BRAFLDRAFT_87563 [Branchiostoma floridae] (2e-39) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0008270 zinc ion binding GO:0005622 intracellular GO:0008150 biological_process |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR022453 Zinc finger, YgiT-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL40331 |
Nucleotide sequence:
ATGGCACTAATGAAAAACAACGGACCCATAATAGACCCAGCTTTATGCCGTTGCTGTAGA
GCTATAAAAAAATGTAGAGTTCTCACAGTGGAGTACACCTGGATGGAGCAGAAAGAGGTT
TACGCGGATATGATCATGGACTGTTTCGGTATACTCCTGTCTCATGTAGATGAAGATGTA
AAAGATAGTGGAGTTTGTGCTACGTGTGTGGTCAGACTGAGAGATGCTTGTGCCTTCAGA
CAACAGGTGCTGCAATGCGAGGAGTTGTTCCTTGGAGCCAAGTTAGGGGATAAGGATGAA
ACCAAAAAGACTTCCGAAATGGAACTGAAAACGGAACCAAAGGATGACTGCAGTGATCAC
AACTCGGTGAACGAGGATCCCAACGACAGCATGTCCTGCGATATTGAGGCTGAAGTGAAA
GACGTGAAGCTTCCAAAGAAAGAGGAAGACGAGAAAGCAGAAGATGGAAACGATGTGAAA
GAAGATTTGGAGGATGTTATGGACGATGAAGATTACAACGACTATATGGATTCCAGTTCG
GACTCGGACAAACCGATCAAGAGGAAAGCTAAGGTGAAGAAGCTAAAGGCGAATAGTACG
AAGAAGAAGAAGAATCTGAAGGCCAAAACTAAGTTGAAGCAGAAACCAGGCTCCTCAACA
GAAAAGAAACTCAAGAAACCGCCAGTTGAAAAGAGGAACACATACGACAGAGACTTGGAT
TGTATGTCAGAGGAAAATCTTTTGACAATCATACAATATTCATATGTATGTCCTTTCAAG
AATAGAAGGAATAATTACTACTGTTTCTACTGCAAAGATTATTATCCAAAACCGGAAGAT
TTACGTGAACATACGATATCCCACGACACGAAACCTTTCCAATTGTTGATGGGCTATAAA
AAAATGCCGAAAATCGACATAACGAGAATCGATTGTAAGCTCTGTCCGATGAAAATCGAT
GATTTGGACACATTCAAACGTCACATCGACGAGGTACATAACAAAAAGATATACTTCGAG
GCCCCGGATAAGATGTTGCTGTACAAACTGACGTGGAACGATCTAGTGTGTGTTATGTGC
AGTGATGTGTTTGAGGACTTTAATACGTTGAACACTCATATGGTGGAGCATTTCAGTAAC
TATACGTGTGACATATGCGGCGTGTGCTTCCTAGAGAAACCGCGTCTGGACGCTCATCTG
AAGCGTCACAAAGACGACGAGCGTCACACGTGCGAGGTTTGCGGTAAAGTGTTCAAATCC
AACCACTACAAGGACATGCACGTTGATATAGTGCACAAGAAGAAAGCTATCATACGTTGC
CCGAGATGCGACGAGTGTTTCATGTCGTACGCGCTTAAAAACAAGCATTTAACGGAAGCT
CACGGTCAAAAACGGACGTATCCGTGCAATTTGTGCGACAAGGTATACAACAGACAGAAG
ACATTGACCGAACACCAGAGACGTAATCATCAGAAAGTCTTGAAGCACCAGTGTGAGTAT
TGCGACCAGAGGTTCTACTTACCATCCCGTCTTAAAGAACATATAGCGACGCACACAGGC
GAAAGGAACTTCAGATGCGAGTACTGCGATAAAAGCTATCCTCGGCTAAAGTCTCTACAG
TATCACATCAGAACTCACACCAACGACAGGAGATACAGGTGCCATATATGCGGCCAGGCC
TTCATACAGAACGCCAGCCTCAAGTCGCATATTAAGAGCCATCATCCCGAATGTGATATC
GAGGGATGTTATTTCTGA
Protein sequence:
MALMKNNGPIIDPALCRCCRAIKKCRVLTVEYTWMEQKEVYADMIMDCFGILLSHVDEDV
KDSGVCATCVVRLRDACAFRQQVLQCEELFLGAKLGDKDETKKTSEMELKTEPKDDCSDH
NSVNEDPNDSMSCDIEAEVKDVKLPKKEEDEKAEDGNDVKEDLEDVMDDEDYNDYMDSSS
DSDKPIKRKAKVKKLKANSTKKKKNLKAKTKLKQKPGSSTEKKLKKPPVEKRNTYDRDLD
CMSEENLLTIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTISHDTKPFQLLMGYK
KMPKIDITRIDCKLCPMKIDDLDTFKRHIDEVHNKKIYFEAPDKMLLYKLTWNDLVCVMC
SDVFEDFNTLNTHMVEHFSNYTCDICGVCFLEKPRLDAHLKRHKDDERHTCEVCGKVFKS
NHYKDMHVDIVHKKKAIIRCPRCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQK
TLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHIATHTGERNFRCEYCDKSYPRLKSLQ
YHIRTHTNDRRYRCHICGQAFIQNASLKSHIKSHHPECDIEGCYF