New model in OGS2.0 | DPOGS208662  |
---|---|
Genomic Position | scaffold594:- 11041-14564 |
See gene structure | |
CDS Length | 1872 |
Paired RNAseq reads   | 286 |
Single RNAseq reads   | 858 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007760 (0.0) |
Best Drosophila hit   | mutagen-sensitive 101 (3e-10) |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to DNA topoisomerase 2-binding protein 1 (DNA topoisomerase II-binding protein 1) (DNA topoisomerase IIbeta-binding protein 1) (TopBP1) [Apis mellifera] (4e-12) |
Best NR hit (blastx)   | PREDICTED: similar to DNA topoisomerase 2-binding protein 1 (DNA topoisomerase II-binding protein 1) (DNA topoisomerase IIbeta-binding protein 1) (TopBP1) [Apis mellifera] (1e-10) |
GeneOntology terms   | GO:0005622 intracellular |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR001357 BRCT IPR012934 Zinc finger, AD-type |
Orthology group | MCL40186 |
Nucleotide sequence:
ATGGTTATGTCTTTTGCCAATGTCCAAATCCACGAAGGAGATGGTTTATCAGATCGTGTA
TGTACAGCTTGCATGGAGAATTTAAGTACTGCCTATTTATTTAAACAGCAGTGTGAGAGA
ATTGATGCATTGATGAGAAAATTTCCAGATGCCCAGATTGATAAATCAGAAATCACAAAT
TACAATGATGTATACAAACAGGAATTTACAATGCACACACAATATATTAATGAAGAAAAC
GATGAAAATTCAGTCAAAGCGACACATGATTCAAGCCATGACTCTAGACTCAGCCCTTGT
TTTGAGACAAGTGATGAAACTGACAGCGATATAGATTCAGTTAAATGTGTTTATTGCAGT
CAGTCTTACAACTACGGCGCCCATACATGTCATGTCACTTGCACAATTGAGCACAATGAA
CTTCAACAATCGAGCAGCAATGAAACACTTGTAGCCACTGATTTAACACCAACCAAATCA
AAAATGCCCGCCATAGACCTGCAAAACGTCAGTGTCTCGTGTGTATTGTGCGATGAAAAA
TTTCAAAGATATGATTCTTATGTCGTACATTTAAATAAATGCACCACTAATGTTAAACTT
CACCATTTCGTGTGTCCCGTCTGTCATGATATGTTTAATGAGAAATTTATGTATCTAGAG
CATCTGAAAGTAGATCATTTCAAAGAAGATGAGTCAATGTTAAGTGATCCTGGTGTTGAC
TGTGTTGATTTTTCACCGATTGTCGTTAAGACAAGGAAACCGATGGCTGTTAGACGACAG
ATTGGTTGGTCTGTTGAGGACATATACCAAGAGATAGATTGTCATAAAATAGAACCGAAA
CCAAGTCCAGCGGCCAGTCCATTGAAGAATTTCTTTTCTAAGTTGGGGAACGAGTCTTTC
AGCAGTAAGCAAAGTACACCTAAGAAGGTCAGCTTTCGTAAGTTTATTGAAAATGGTAAA
GCAAAGACCTCTGTATATCTACCATTTAAGAAATACATTCAGAATTATAAACTTAAAAAG
AAGATGTCAAACTACAGCCCTATAAATTCCAAGCAACAAATTACTAGCACAATACAAGCT
ACTATTCCAGAATATGTTTCAGACAGTGATTATGGCTCACCAAGCGGAACATCGGAGGAT
TCCTGGAAGATGAAACAAACTTTGATATGTGCATGTGACAAGAAAATATTCATGCTCTCT
GAACACATCCATGATCGTGACAGAATAGTTGCAATGATAAATGAGCTGGGTGGAGTGGTT
GCCGAGAATACTAAAATGGAGATGTTGGCAACACATTTTATTTCAGTGTTGCCAAATGAT
ACATTCACTGGCATGATGGTTTGTTCCTTGGCCACAGGAAAATGGCTACTGCACATCAGC
TTCATCTATGATAGTTTTAGATGCAAGAAGTTTTTACAAGAAAATATGTATGAATGGATG
AGACATCCCAAAATATTAGAAATTGACAATACCAGCATAGAAATTGCGAAATCAGCTGTG
TTCTGGCAAATGGAACTACAAAACAAGAAATCTAAATATCCATTTGAAGGGAAACAGATT
GTTCTCATCATGAAGAAGAAGTATAGACAGTACTATCACATGATATTCAAGAGTCTCAAA
GCGAAACCAGTCACTTATGATCCAAGAACACCTGGAAGTTGCTGTTCTGCTGACTATTGC
TTTGTCGACATGAAAATCATTGAAAGAGTCAAATTACGTTTTTTCTTTCATCACAATGTC
CCAGTATTCCCCTACCAGTATATTCTGGTATATCTACTCAAGAGAGGAAAAGTGGACGAT
GAACACAAATATTTACTTCAAGACTGTAGTAAAATAAAAAACGAAGATTTTTTCTTCAAC
AATACTTATTAG
Protein sequence:
MVMSFANVQIHEGDGLSDRVCTACMENLSTAYLFKQQCERIDALMRKFPDAQIDKSEITN
YNDVYKQEFTMHTQYINEENDENSVKATHDSSHDSRLSPCFETSDETDSDIDSVKCVYCS
QSYNYGAHTCHVTCTIEHNELQQSSSNETLVATDLTPTKSKMPAIDLQNVSVSCVLCDEK
FQRYDSYVVHLNKCTTNVKLHHFVCPVCHDMFNEKFMYLEHLKVDHFKEDESMLSDPGVD
CVDFSPIVVKTRKPMAVRRQIGWSVEDIYQEIDCHKIEPKPSPAASPLKNFFSKLGNESF
SSKQSTPKKVSFRKFIENGKAKTSVYLPFKKYIQNYKLKKKMSNYSPINSKQQITSTIQA
TIPEYVSDSDYGSPSGTSEDSWKMKQTLICACDKKIFMLSEHIHDRDRIVAMINELGGVV
AENTKMEMLATHFISVLPNDTFTGMMVCSLATGKWLLHISFIYDSFRCKKFLQENMYEWM
RHPKILEIDNTSIEIAKSAVFWQMELQNKKSKYPFEGKQIVLIMKKKYRQYYHMIFKSLK
AKPVTYDPRTPGSCCSADYCFVDMKIIERVKLRFFFHHNVPVFPYQYILVYLLKRGKVDD
EHKYLLQDCSKIKNEDFFFNNTY