New model in OGS2.0 | DPOGS202066  |
---|---|
Genomic Position | scaffold1411:- 20907-22272 |
See gene structure | |
CDS Length | 1035 |
Paired RNAseq reads   | 81 |
Single RNAseq reads   | 193 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002445 (4e-97) |
Best Drosophila hit   | adat (2e-38) |
Best Human hit | tRNA-specific adenosine deaminase 1 (1e-31) |
Best NR hit (blastp)   | adenosine deaminase acting on tRNA, putative [Pediculus humanus corporis] (6e-59) |
Best NR hit (blastx)   | adenosine deaminase acting on tRNA, putative [Pediculus humanus corporis] (9e-59) |
GeneOntology terms    | GO:0003723 RNA binding GO:0008033 tRNA processing GO:0008251 tRNA-specific adenosine deaminase activity |
InterPro families   | IPR002466 Adenosine deaminase/editase |
Orthology group | MCL13960 |
Nucleotide sequence:
ATGTCATCCTTAGGTAACATTCTAAATGACTCTCATGCTGAAATAATTGCTAGAAGAGGA
TTTCTTTTATATTTATATAAAAACATTTTAGACACCTTAAATGAAAAATCCTCGATATTC
ATCAGAGAAAATGAAAAATTTAAATTAAAAGATAACCTAGAATATTTGTTTTATTCATCA
CAGATGCCTTGTGGAGATGCTTCGATCATACCTAAGTGTGGCGAACAAGATGACTATGGA
GATTTAATTATTAATAGCAAGAGAAAAGCTGATATTAATATATGTGAAATACAAAGTAAG
AAAGTTAAAATGGATATACATAGAACCGGAGCTAAATGTTTAACACACAGAAACCAGGAT
CCAAAGGAACCCGGTGATAAGTATCACCTAATAGGCCAAGTAAGAACTAAACCCGGTAGA
GGAGATCGTACATTATCGGTGTCATGTAGCGACAAAATTGCTAGATGGATCCATTTAGGC
ATCCAAGGAGCGTTGTTGAGTTTAATTTTACATGAACCCATCTTTATTAAATGCTTTATA
TTTGGCTCTGGGACACCTTATTCCAAAGAGAGTCTCAACAGAGCACTAATATATAGGGAT
AATGAAGATGTACTAGGGAGATTACAAGTAGTTCCTGAATTTCATAACTCATCAATAGTG
TTTCCGCATATTAGAACTACCAATAGCCTCAGACCTTCAGCCGGCAGTATAATATATGTT
AACATAAATAATGGCTTACAAGAGGTCGCAGTTCAAGGTGTGAAGTTGGGTTTAACAAAA
AAGAGAGCGAATTCTTTAAACCACTGCTTAAGTATTTGTAAATACAGTTTATATAGAATA
TTCTTGGAGATTCTTGAAAAAAATCATGATCTGAAAAAGATTATTTGCTGTGAGGAATTA
AAAGACATCCCATACAACAAGATGAAACGGAAGGCTATATTGTATCAGGAGAAATGGACA
GAAATAAAAGACAATTTCTTTAAAGCATGGACAGTTAAACCAGATATATGGAATTTTTGT
ATAAACGATAAATAA
Protein sequence:
MSSLGNILNDSHAEIIARRGFLLYLYKNILDTLNEKSSIFIRENEKFKLKDNLEYLFYSS
QMPCGDASIIPKCGEQDDYGDLIINSKRKADINICEIQSKKVKMDIHRTGAKCLTHRNQD
PKEPGDKYHLIGQVRTKPGRGDRTLSVSCSDKIARWIHLGIQGALLSLILHEPIFIKCFI
FGSGTPYSKESLNRALIYRDNEDVLGRLQVVPEFHNSSIVFPHIRTTNSLRPSAGSIIYV
NINNGLQEVAVQGVKLGLTKKRANSLNHCLSICKYSLYRIFLEILEKNHDLKKIICCEEL
KDIPYNKMKRKAILYQEKWTEIKDNFFKAWTVKPDIWNFCINDK