| New model in OGS2.0 | DPOGS202013 |
|---|---|
| Genomic Position | scaffold1411:+ 27112-28545 |
| See gene structure | |
| CDS Length | 1185 |
| Paired RNAseq reads | 177 |
| Single RNAseq reads | 532 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002444 (1e-131) |
| Best Drosophila hit | tetracycline resistance (1e-08) |
| Best Human hit | major facilitator superfamily domain-containing protein 9 (2e-31) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC016221 [Tribolium castaneum] (2e-61) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC016221 [Tribolium castaneum] (2e-59) |
| GeneOntology terms | GO:0055085 transmembrane transport GO:0016021 integral to membrane GO:0005215 transporter activity GO:0016020 membrane GO:0046677 response to antibiotic GO:0015904 tetracycline transport GO:0015520 tetracycline:hydrogen antiporter activity |
| InterPro families | IPR016196 Major facilitator superfamily, general substrate transporter IPR020846 Major facilitator superfamily IPR011701 Major facilitator superfamily MFS-1 IPR001958 Tetracycline resistance protein, TetA |
| Orthology group | MCL20514 |
Nucleotide sequence:
GATTTACTTGCTGTTGGTCTGATAGTACCATTAATACCTAATCATGTTAAACAAATGGGT
GGTAGCCAACTATACATTGGCCTTCTTGGCTCCATTTATGCTGGTTTCCAACTGGGAGCA
GGCCCACTTATTGGAAGTTTAAGTGATATAAGAGGACGGAAACCAATACTACTCCTAACA
CTACTAGTATGTAGTGTTGCCTATATGACGTTGGGTTTAACGTCATCTATTGCTATTATA
TTTGTATTGCGGGCTGTTTTAGGTCTGTTTAAACAAACACAATTATTAACTAAAGCTTTG
GTACCTGATTATGAAAAAGTGGAAAGCAAACAGTCCCAAATATATGGTAAAATGGCAGCA
ATATCAGGAGTTGGAATAACATTGGGACCAATTTTTGGTGGACACATTGTTGAAGACTAC
CCTCTTTATGGATTTACTATTATCGGTGCAATTGTTAGCACCTTCTTTTTAATAAATGCA
GGATTGATATACATGCTGCCAAAAACTGATTGTATAATTAAAACTAAAGCCCAAACAAAA
GATGTATCACAGAATTTCTTCCAATCGTTACTTTCTGGCATTAAACAGACTTTTGTTGAG
TTATCCAAAGTGGAATGGCTAAAATATTGGAAAATTTTTATGTTTCAAGCCTTAAACAGT
TTTGCTATGGGTGTTTATTACTCTAGTTATGCATTATATTTAAAAACACAGTTTGGTTTA
ACTCCAAAGAATATTGGATATGTGGTGTCCATACAAGGAGTTATTGGTGCAATATCTTCC
TTTTTCATGGGTCGTATAAACAGTTTATATGTCCACGACAAAGACTATAGTATACGAAAT
AATCATGTATTTTTATTATTAAGTATGTCCTTATTAGGAATATGTTTGGCATTCAATATT
TATATGTATTCAATTTTGTTAATTCCATTAGCGGTAGGTAATGCAGTTGGAAGACTGGTG
ACTCTTGAAATGGTGCTAAAAAGAAGTAAAGGGGATCATAGGGGAACTTTAATAGGAGCT
TCCAATAGTGTAAGGTCATTAACTGGAGTCATAGCACCAATGGTGGCTGGTTTTATTGGG
GAATTTTTTGGCATTTCATATGTTTTATATGCATCTTTCTTTTCAACATTTGTTGGGCTT
ATATTCAGTTATCAGTTTAGAAGTAAACAGAGTAAAGTGGATTAG
Protein sequence:
DLLAVGLIVPLIPNHVKQMGGSQLYIGLLGSIYAGFQLGAGPLIGSLSDIRGRKPILLLT
LLVCSVAYMTLGLTSSIAIIFVLRAVLGLFKQTQLLTKALVPDYEKVESKQSQIYGKMAA
ISGVGITLGPIFGGHIVEDYPLYGFTIIGAIVSTFFLINAGLIYMLPKTDCIIKTKAQTK
DVSQNFFQSLLSGIKQTFVELSKVEWLKYWKIFMFQALNSFAMGVYYSSYALYLKTQFGL
TPKNIGYVVSIQGVIGAISSFFMGRINSLYVHDKDYSIRNNHVFLLLSMSLLGICLAFNI
YMYSILLIPLAVGNAVGRLVTLEMVLKRSKGDHRGTLIGASNSVRSLTGVIAPMVAGFIG
EFFGISYVLYASFFSTFVGLIFSYQFRSKQSKVD