| New model in OGS2.0 | DPOGS214501 |
|---|---|
| Genomic Position | scaffold1137:+ 18965-26191 |
| See gene structure | |
| CDS Length | 2214 |
| Paired RNAseq reads | 177 |
| Single RNAseq reads | 553 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013346 (3e-12) |
| Best Drosophila hit | Ca[2+]-channel protein alpha[[1]] subunit D, isoform A (0.0) |
| Best Human hit | voltage-dependent L-type calcium channel subunit alpha-1C isoform 19 (0.0) |
| Best NR hit (blastp) | Anopheles gambiae str. PEST AGAP012434-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | voltage-dependent p/q type calcium channel [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0005891 voltage-gated calcium channel complex GO:0005245 voltage-gated calcium channel activity GO:0006816 calcium ion transport GO:0006936 muscle contraction GO:0042045 epithelial fluid transport GO:0016324 apical plasma membrane GO:0016323 basolateral plasma membrane GO:0009790 embryo development GO:0005509 calcium ion binding GO:0055085 transmembrane transport |
| InterPro families | IPR005821 Ion transport IPR002077 Voltage-dependent calcium channel, alpha-1 subunit IPR005446 Voltage-dependent calcium channel, L-type, alpha-1 subunit |
| Orthology group | MCL10088 |
Nucleotide sequence:
ATGGCGGATCAAGTTCAAGTAACCGATGCCACGACGCCGGACGCCGAGGCGCCAGACACT
GGCCAGGCCGCCGCCAAGCCACAGCCACGGAAACAGGCAAGGCCAAGAGGGAAGCCACAA
CCAGAGAAGCCTGAAAGAAGTCTGTTCTGTCTAGGGAAAAAGAATCCGATAAGAAAATTT
TGCTATGACGTAATCGAATGGAAACCGTTCGAATATATGATATTGACAACGATATTCGCC
AATTGCATAGCGCTGGCTGTCTTCACCCCCTACCCTGCAGGGGACACAAACAACACAAAT
CAAATATTGGAAAAGGTGGAATGGATTTTTATGGCCATCTTCACCTGCGAGTGCGTGATG
AAGATTATAGCTTACGGATTCCTGTTTCATCCTGGCGCCTATCTCAGGAATACTTGGAAC
AGTCTCGACTTCACTATTGTGACGATTGGTATAGCCAGTCAGATACTTCAAAACATTTCA
AAAGACCTATTCGATGTAAAAGCATTGAGAGCCTTTAGAGTGCTTCGTCCTCTGCGATTG
GTTTCGGGAGTTCCAAGTCTTCAAATCGTGCTCAACTCAATATTGAAGGCGATGGTGCCA
TTATTCCACATCGCGTTCCTCGTGTTGTTCGTCATCATCATCTACGCTATCATAGGACTC
GAGCTGTTCTCGGGTGTTTTGCATGACACCTGTTTTGACAACGTCACTAAGAAGATGGTG
GAAGAGCCAACTCCGTGCTCCAGAGACGCCGATGTTGGGAATCACTGTGAGGAGGGTCAG
ATCTGTCGTGACTATTGGCTTGGACCAAACTTCGGGATCACCAACTTCGACAACATCGGA
TACTCCATGCTGACGGTGTTCCAGTGCATCACACTCGAGGGCTGGACAGACATTATGTAC
GCCATAGCAGATGTAAAAGGCAACACGTGGGTGTGGATATATTTTGTGTCATTGGTTATT
TTTGGAAATTTCTTTGTTATGAACCTTATTCTTGGTGTCTTATCTGGAGAATTTTCGAAG
GAAAGAGAGAAGGCAAAAAATCGTGGAGATTTCCAGAAATCTCGTGAAAGGCAACAATTC
GAAGAAGATCTGAAAGGATATTTGAACTGGATCACTGTTGCCGAGGAGTTGGATCTTGAG
AATGATCAAGGACAGAAGGAGGAAGATCGAGACGCTCAAGGAAACAAAAAAGAGCGCAGA
AGTAATGATGGCTCACAGAGTAACGTTAACGGAGACCCGCCAACCACAGTTTCTTGCAAG
ATATATTGCAGAAGATTTGATAAGGTGAATCGTCGTATGCGTCGCGCGTGTCGTAAGGCG
GTCAAGTCCCAGACGTTCTACTGGGCTATCATCGTACTCGTCTTCCTGAACACTTTAGTG
CTGGCCACAGAACACTACGGTCAAGAGCCCTGGCTAGATCACTTCCAGAATTATGCTAAC
GTGCTGTTTGTGGTCCTGTTTTCCACTGAGATGCTCGTCAAGATGTACGCTTTGGGATTT
CAGGGCTACTTCGTGTCTCTCTTCAACCGATTCGATTGCTTCGTGATGGTGTGTTCTATT
GTGGAGCTTGGTCTCACGTACACCAACAACATACCGCAGCTTGGGATCTCCGTGTTGCGA
TGCGTTCGGCTGCTGAGGGTCTTCAAGGTCACCAAGTATTGGCGATCTCTATCAAACCTC
GTGGCGTCTCTTCTAAATTCGATCCAGTCAATTTTCTCTCTCCTCCTTCTACTGTTCCTC
TTCATCATGATATTTGCCCTCCTTGGCATGCAGGTATTCGGTGGAAGATTTGACTACGCA
GCGGAAGAACAAAAAGAGAGACATAATTTTGACTCCTTCTGGCAGGCCGTGCTGACAATG
TTTCAGATTCTAACCGGCGAGGATTGGAACGTCGTGATGTATCATGGCATCAACGCGTAC
GGAGGCGTCGGCACGCCGGGCATGTTGGCGTCTATATACTTCATCATAATATTCATTTGC
GGCAACTATATTCTTTTGAACGTGTTCTTGGCTATCGCGGTCGACAACTTAGGTGACGCT
GAAGATATGGATGAAGAGATTGTTAAGGAGAAGGAGGACGCTGATAATCCAGAAGCAGGT
AATCCACAACTGGATGAAGAAAGAGGTGAGACAGACGACGAGTACGTCAACGAAGAAGAA
GGGTATTCCAGTGAGGGCCGGAAGTATAAAGCGTATAAAAGAGTTGCGGGGTAA
Protein sequence:
MADQVQVTDATTPDAEAPDTGQAAAKPQPRKQARPRGKPQPEKPERSLFCLGKKNPIRKF
CYDVIEWKPFEYMILTTIFANCIALAVFTPYPAGDTNNTNQILEKVEWIFMAIFTCECVM
KIIAYGFLFHPGAYLRNTWNSLDFTIVTIGIASQILQNISKDLFDVKALRAFRVLRPLRL
VSGVPSLQIVLNSILKAMVPLFHIAFLVLFVIIIYAIIGLELFSGVLHDTCFDNVTKKMV
EEPTPCSRDADVGNHCEEGQICRDYWLGPNFGITNFDNIGYSMLTVFQCITLEGWTDIMY
AIADVKGNTWVWIYFVSLVIFGNFFVMNLILGVLSGEFSKEREKAKNRGDFQKSRERQQF
EEDLKGYLNWITVAEELDLENDQGQKEEDRDAQGNKKERRSNDGSQSNVNGDPPTTVSCK
IYCRRFDKVNRRMRRACRKAVKSQTFYWAIIVLVFLNTLVLATEHYGQEPWLDHFQNYAN
VLFVVLFSTEMLVKMYALGFQGYFVSLFNRFDCFVMVCSIVELGLTYTNNIPQLGISVLR
CVRLLRVFKVTKYWRSLSNLVASLLNSIQSIFSLLLLLFLFIMIFALLGMQVFGGRFDYA
AEEQKERHNFDSFWQAVLTMFQILTGEDWNVVMYHGINAYGGVGTPGMLASIYFIIIFIC
GNYILLNVFLAIAVDNLGDAEDMDEEIVKEKEDADNPEAGNPQLDEERGETDDEYVNEEE
GYSSEGRKYKAYKRVAG