| New model in OGS2.0 | DPOGS205356 |
|---|---|
| Genomic Position | scaffold1207:- 9026-11306 |
| See gene structure | |
| CDS Length | 930 |
| Paired RNAseq reads | 39944 |
| Single RNAseq reads | 119077 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007311 (5e-112) |
| Best Drosophila hit | stubarista, isoform B (2e-93) |
| Best Human hit | 40S ribosomal protein SA (1e-88) |
| Best NR hit (blastp) | 40S ribosomal protein SA [Bombyx mori] (2e-130) |
| Best NR hit (blastx) | 40S ribosomal protein SA [Bombyx mori] (3e-112) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0022627 cytosolic small ribosomal subunit GO:0006412 translation GO:0005840 ribosome GO:0005811 lipid particle GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation GO:0005875 microtubule associated complex |
| InterPro families | IPR005707 Ribosomal protein S2, eukaryotic/archaeal IPR023591 Ribosomal protein S2, flavodoxin-like domain IPR018130 Ribosomal protein S2, conserved site IPR001865 Ribosomal protein S2 |
| Orthology group | MCL11118 |
Nucleotide sequence:
ATGTCGGGAGGATTAGACATACTAGCCCTCAACGAGGAAGATGTAACCAAAATGTTGGCG
GCGACAACCCATTTGGGGTCCGAGAATGTCCACTTCCAGATGGAAACCTACGTGTACAAG
CGTCGTGCTGATGGCACCCACGTCATCAACCTTCGCCGTACATGGGAGAAGCTAGTGTTG
GCCGCACGTGCGGTAGTCGCTATCGAGAATCCCGCGGATATCTTCGTGATATCTTCTCGT
CCTTTCGGTCAACGTGCCGTGCTTAAGTTCGCAGCTCACACTGGAGCCACACCTATCGCT
GGACGTTTCACACCTGGTGCCTTCACCAACCAGATCCAAGCCGCTTTCCGTGAGCCTCGT
CTCTTGATTGTCTTGGACCCAGCTCAAGATCATCAGCCGATCACCGAGGCTTCATATGTG
AACATTCCAGTCATTGCTTTCTGCAACACTGACTCCCCACTCAGATTTGTTGACATTGCC
ATCCCCTGCAACACTAAGTCGTCCCATTCCATTGGTTTGATGTGGTGGCTGTTGGCACGC
GAGGTTCTACGCCTGCGGGGTGTGCTAGCTAGAGATCAGAAGTGGGATGTTGTTGTGGAC
CTGTTCTTCTACAGAGACCCTGAGGAGAGCGAGAAGGAGGAACAACAGGCTAAGGAACAG
GCTGTTGTAGCTGCTAAGGCTGAGGAGGCTGTGCTTCCTGTGGAGTATGTGGAGCCGGTT
GAGGCTCCAACTGTATGGGCTGATGATACACCTGGAGCACCTGCTGCTGCTGTAGCCTTC
ACCGCCACACCACCCAAGGAAGACTGGGCTGCTCAGGTCCAAGAGGAATGGCCGAACGCG
CCAACAGCCCCCGCCCCGGCCGCGGCCGCTGCACCGTCATGGGGTGGATCCACCCCAGGG
ATGGAATCCAGCTTAAACGTCCACTCCTAA
Protein sequence:
MSGGLDILALNEEDVTKMLAATTHLGSENVHFQMETYVYKRRADGTHVINLRRTWEKLVL
AARAVVAIENPADIFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR
LLIVLDPAQDHQPITEASYVNIPVIAFCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAR
EVLRLRGVLARDQKWDVVVDLFFYRDPEESEKEEQQAKEQAVVAAKAEEAVLPVEYVEPV
EAPTVWADDTPGAPAAAVAFTATPPKEDWAAQVQEEWPNAPTAPAPAAAAAPSWGGSTPG
MESSLNVHS