DPGLEAN16778 in OGS1.0

Genomic Positionscaffold2864:- 11133-11966
See gene structure
CDS Length834
Paired RNAseq reads  0
Single RNAseq reads  0
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012158 (3e-47)
Best Drosophila hit  ND
Best Human hittigger transposable element-derived protein 4 (4e-33)
Best NR hit (blastp)  PREDICTED: similar to tigger transposable element derived 4 [Acyrthosiphon pisum] (3e-41)
Best NR hit (blastx)  PREDICTED: similar to tigger transposable element derived 4 [Acyrthosiphon pisum] (3e-40)
GeneOntology terms






  
GO:0005634 nucleus
GO:0003677 DNA binding
GO:0045449 regulation of transcription
GO:0000775 chromosome, centromeric region
GO:0003676 nucleic acid binding
GO:0005575 cellular_component
GO:0003674 molecular_function
GO:0008150 biological_process
InterPro families  IPR004875 DDE superfamily endonuclease, CENP-B-like
Orthology groupND

Nucleotide sequence:

ATGGCAGGCGAAAAACGAAAATTGCTGGTTATAGGGAAGGCGAAAAAACCAAGGTGTTTA
AAGAATGTTAAAACTTTGCCAGTTGATTACGAAACGAACAAAAAAGCGTGGATAACATCG
GAGATTTTCGAAAAAGTTTTAAGGAAATGGGGCTCTGAGCTAAGAGGAAACAAAAAGAAG
ATCATTTTATTTATTGATAATTGTCCAGCTCACCCACAAATTCTAAATTTGACAAACATC
AGACTGGCATTTTTACCACTAAATACCACATCAGTTATTCAGCCTATTGATCAAGGTATA
ATTAAAAATCTTAAAAGCCATTATCGAAAGCTTCTAGTGGAAAAAATCATAAACGACACT
GGAAAAAGTAGTACCCCATTTGCCGTTAATCTTCTGAATGCCACTGAAATATTAACAACA
GCATGGGCAAGAGTAACTCCAGATACGATTAAAAAATATTTTTCACACGCTGCGTTTGGT
AAGTTTTCAATTTTAAATACAACTGCTTACGATTCTGGTGATGAATTGGACAATTTGCCA
TTTGCGAGACTATCATCAGCGGAACAGGGCCGGCCCGCCCTTATAGGCAAACTAGGCAAC
TGCCTAGGGCGCTCGTATTTGGGGGCGGCATCACCACTGAGCACGCGGGTCGATCAAAAA
TTGTTCAATCAATCGTACGTACGCGCGACAGACGTGCGGCGTGACGCGCATCGCAACTCG
CGGAGCGCGCCGCCACCGTCCCGTTCCCCGCCGCCCCCCACGCATGCCATCGCCGCCGCG
CCACCCGCGCACTCTAAACTATCTCATGTGTTCTCCGTCAACTCTATGCGCTAA

Protein sequence:

MAGEKRKLLVIGKAKKPRCLKNVKTLPVDYETNKKAWITSEIFEKVLRKWGSELRGNKKK
IILFIDNCPAHPQILNLTNIRLAFLPLNTTSVIQPIDQGIIKNLKSHYRKLLVEKIINDT
GKSSTPFAVNLLNATEILTTAWARVTPDTIKKYFSHAAFGKFSILNTTAYDSGDELDNLP
FARLSSAEQGRPALIGKLGNCLGRSYLGAASPLSTRVDQKLFNQSYVRATDVRRDAHRNS
RSAPPPSRSPPPPTHAIAAAPPAHSKLSHVFSVNSMR