| New model in OGS2.0 | DPOGS201048 |
|---|---|
| Genomic Position | scaffold2466:- 100-10649 |
| See gene structure | |
| CDS Length | 1527 |
| Paired RNAseq reads | 440 |
| Single RNAseq reads | 1581 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012489 (0.0) |
| Best Drosophila hit | coro, isoform B (5e-99) |
| Best Human hit | coronin-2B isoform 1 (5e-116) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000029333 [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000029333 [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0016020 membrane GO:0003779 actin binding GO:0030036 actin cytoskeleton organization GO:0005737 cytoplasm GO:0015629 actin cytoskeleton |
| InterPro families | IPR015505 Coronin IPR001680 WD40 repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015049 Domain of unknown function DUF1900 IPR015048 Domain of unknown function DUF1899 IPR019781 WD40 repeat, subgroup |
| Orthology group | MCL15149 |
Nucleotide sequence:
ATGCCTCCTGTAAAAGATGATCTGATTTTTAACTGTGTAGAGGTAAACATACCTGAAAAA
AGCCCAGGAAAAGGTACAGCATTAGTAGATGTGAGGGCCTGTAATAAACCTGCCGCTAAG
GTATGGTTCCGTGGAGTTCGTAGCTCGAAGTTTCGTCACGTGTACGGTGTGCCGTTCAAA
CGTGAGAGATGCTATGATAATATAAAAATAACGAGAAACGCCCACGATTCCAACTTCTGT
GCCGTGAACCCCAAGTTTGTGGCTATCGTCACCGAAGTTGCAGGCGGGGGAGCCTTCCTA
GTACTGCCTTTGGATCACGTGAAGATATGGCACATCCCTGATGGTGGCCTATCTATGCAC
CTCACCGACTGGCTGGTTGAGCTCCACGGGCACAAGAGGCGTGTGGCCTACATAGAGTGG
CATCCCACGGCTGAGAACATACTGTTTAGTGCTGGATTCGATTATCTGATCTTTGTATGG
GATGTGGGCAAGGGCGAGGCTGTTAAGGTCATCGATTGCCACAGTGACGTCATCTATTGC
ATGTCCTTCAATCGTGACGGATCACTGTTAGCGACCACCTGCAAGGACAAGAAACTACGG
GTTATAGAGCCTAGGCGAGGGATCGTGCTGTCTGAGGGGCCCTGTCACCTCGGCACCAAG
GCTTCCAAGTGCACGTTCCTTGGCGCTCAGTGCAAAGTATTGACAACTGGTTTCTCGCGA
CACAGCGACCGTCAGTACGCCGTTTGGGACCAACACGACGTGAGCGAGCCCCTCGCCTCC
GAGACCATCGACAGCTCCTCAGGAGTCGTCTTCCCCTACTACGATCACGATACCAACATG
GTCTATCTGGCTGGCAAAGGCGACGGCAACATCCGTTACTACGAAGTAGTGGACGAGGCG
CCCTACGTGCATTTCCTCAACCAGTTCCTGTCAGGCAACCCTCAGCGTGGTCTGGGCTTC
ATGCCTAAGCGTGGCGTGAACACATCTATGTGCGAAGTGTTCCGTTTCTACAAGCTGCAC
ACATCCCGTGGCCTCTGCGAGCCCATATCTATGATCGTACCGCGCAAGTCCGACTGCTTC
CAGGAGGATTTGTACCCTGACACGGCCGCTCCTCAGCCGGCCCTCTCAGCACGCGACTGG
CTCAGCGGAGTAAATGCACCGCCACTACTCATTAGTATGAAAACAGGGGTGACGATATCC
ACGCACAAGCCCCGGAACAACAAGGACGCGCCCGCGCTGCAGCCGCAGGACGCCAACAAC
AGAAAGAAGTTCGCCTTTCTGTCGCGTGAGACGACCCCCGACTACCGCCCTCTAGCGACG
TGGCAGGGCAACCAGGACGATACGCAGCAGGTTCAAGTGACGGAGAAGTGTCAGAAGCAG
AACACCAACCAGAACACGAAGTTCCACCAGCTCCAGAGGATGTTCGGCAAACAGGCCGGT
GACGTGGAAGTAGTGCCGCTCTACAAACAGATCAACCAGGGAGACGTTTTCAACACGGAG
CACGAGGTGAACCACACTACTCTCTAA
Protein sequence:
MPPVKDDLIFNCVEVNIPEKSPGKGTALVDVRACNKPAAKVWFRGVRSSKFRHVYGVPFK
RERCYDNIKITRNAHDSNFCAVNPKFVAIVTEVAGGGAFLVLPLDHVKIWHIPDGGLSMH
LTDWLVELHGHKRRVAYIEWHPTAENILFSAGFDYLIFVWDVGKGEAVKVIDCHSDVIYC
MSFNRDGSLLATTCKDKKLRVIEPRRGIVLSEGPCHLGTKASKCTFLGAQCKVLTTGFSR
HSDRQYAVWDQHDVSEPLASETIDSSSGVVFPYYDHDTNMVYLAGKGDGNIRYYEVVDEA
PYVHFLNQFLSGNPQRGLGFMPKRGVNTSMCEVFRFYKLHTSRGLCEPISMIVPRKSDCF
QEDLYPDTAAPQPALSARDWLSGVNAPPLLISMKTGVTISTHKPRNNKDAPALQPQDANN
RKKFAFLSRETTPDYRPLATWQGNQDDTQQVQVTEKCQKQNTNQNTKFHQLQRMFGKQAG
DVEVVPLYKQINQGDVFNTEHEVNHTTL