New model in OGS2.0 | DPOGS215701  |
---|---|
Genomic Position | scaffold1240:+ 15399-16363 |
See gene structure | |
CDS Length | 471 |
Paired RNAseq reads   | 598 |
Single RNAseq reads   | 1432 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003637 (2e-54) |
Best Drosophila hit   | primo-1, isoform B (2e-37) |
Best Human hit | low molecular weight phosphotyrosine protein phosphatase isoform c (3e-39) |
Best NR hit (blastp)   | acid phosphatase isoenzyme [Bombyx mori] (1e-67) |
Best NR hit (blastx)   | acid phosphatase isoenzyme [Bombyx mori] (2e-68) |
GeneOntology terms    | GO:0006470 protein amino acid dephosphorylation GO:0003993 acid phosphatase activity GO:0004726 non-membrane spanning protein tyrosine phosphatase activity GO:0005625 soluble fraction GO:0016787 hydrolase activity GO:0005737 cytoplasm GO:0042802 identical protein binding |
InterPro families    | IPR017867 Protein-tyrosine phosphatase, low molecular weight IPR023485 Phosphotyrosine protein phosphatase I superfamily IPR000106 Protein-tyrosine phosphatase/arsenate reductase IPR002115 Protein-tyrosine phosphatase, low molecular weight, mammalian |
Orthology group | MCL11839 |
Nucleotide sequence:
ATGTCTGGGCAAAAAAAGAAGGCATTGTTTATTTGTTTAGGAAATATATGCCGATCGCCG
ATAGCAGAAGGTGTGTTTCGTAAAATTGCCGACGATACGTGGGAAATAGACAGTGCAGCC
ATCGGCGGCTGGCACGTCGGTAATCCGCCGGACTGGAGGGCTTTAGATACTATGAAAAAA
CATGATGTACCGTATAATAATTGTGCCAGGCAGATATCTACGAAAGACTTCAATGAATAT
GACTTTATATTTGGTATGGATGAAGAGAACATGAGAGATCTAAACAGGAAGGCCCCTAAA
GGATCGAAGGCAAAGCTGTTTCTGTTCGGAGATTTTGATCCCGAAGGAGACAGAATTATA
CGAGACCCGTATTATGACAGCGACTCTAAAGGGTTTGAGAAGTGTTACGAGCAATGCGTC
CGCTGCTCCCATGGTTTCTTAGAGCAGTTGGCTCAAGGGAAAATAAAATAA
Protein sequence:
MSGQKKKALFICLGNICRSPIAEGVFRKIADDTWEIDSAAIGGWHVGNPPDWRALDTMKK
HDVPYNNCARQISTKDFNEYDFIFGMDEENMRDLNRKAPKGSKAKLFLFGDFDPEGDRII
RDPYYDSDSKGFEKCYEQCVRCSHGFLEQLAQGKIK