| New model in OGS2.0 | DPOGS205270 |
|---|---|
| Genomic Position | scaffold791:- 66255-67027 |
| See gene structure | |
| CDS Length | 603 |
| Paired RNAseq reads | 484 |
| Single RNAseq reads | 1133 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011070 (1e-93) |
| Best Drosophila hit | thoc7, isoform A (3e-34) |
| Best Human hit | THO complex subunit 7 homolog (2e-41) |
| Best NR hit (blastp) | PREDICTED: similar to Ngg1 interacting factor 3 like 1 binding protein 1 [Apis mellifera] (5e-57) |
| Best NR hit (blastx) | PREDICTED: similar to Ngg1 interacting factor 3 like 1 binding protein 1 [Apis mellifera] (2e-55) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005634 nucleus GO:0006810 transport GO:0003723 RNA binding GO:0051028 mRNA transport GO:0008380 RNA splicing GO:0006397 mRNA processing GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR018018 Tho complex subunit 7 IPR008501 Tho complex subunit 7/Mft1p |
| Orthology group | MCL14094 |
Nucleotide sequence:
ATGGCTGACGAGGACGTTATTCGGAGGCGTCTACTGATAGATGGGGATGGAACCGGCGAT
GACAGACGGCTTAATGTTTTACTTAAAACTTTAATAAAGTGGTCAAATAGCACTGATGAA
AAACCGGAAGAGAGTAAAGCAACACACGACAGAATGCTTGCACAGCTTGCACAATGTGAA
TTTGCAGTTACAAAATCACAGCTAGGCTCAGAGATGATGGCTGCGGAATTAAAGAGCTAT
GAAGCACTATCAAAAATACTTGAAAATGGCATAGAAGTTGCTAAAGGTAATATAGAAAAG
AGCAAATCCGATTTGACACAAGCAAAAACAGTTAGAAAGAATCGCATTGAATATGATGTC
CTCGCAAAAGTTATCAGCGAACAGCCCGATAGAAAGGAAACTTTGGAACGTCTAAGTACA
TTAAAAATGGAGTTGAGCAATTTAGAAGGGACAAGACAACAATTGGAGAGTCGTCTGTCT
TTGAGAAAAAAACAATTCCATGTGTTGGTAACATCAATACATCAGTTACAAGCACTGTTA
GATGAGAATGATGATATAGAAATGACATCTGATGATGTTGAAATGAAGGAAGCTTCTATT
TAA
Protein sequence:
MADEDVIRRRLLIDGDGTGDDRRLNVLLKTLIKWSNSTDEKPEESKATHDRMLAQLAQCE
FAVTKSQLGSEMMAAELKSYEALSKILENGIEVAKGNIEKSKSDLTQAKTVRKNRIEYDV
LAKVISEQPDRKETLERLSTLKMELSNLEGTRQQLESRLSLRKKQFHVLVTSIHQLQALL
DENDDIEMTSDDVEMKEASI