| New model in OGS2.0 | DPOGS205298 |
|---|---|
| Genomic Position | scaffold791:+ 17658-30882 |
| See gene structure | |
| CDS Length | 3687 |
| Paired RNAseq reads | 2869 |
| Single RNAseq reads | 6698 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011039 (0.0) |
| Best Drosophila hit | Chromosome-associated protein, isoform A (0.0) |
| Best Human hit | structural maintenance of chromosomes protein 3 (0.0) |
| Best NR hit (blastp) | structural maintenance of chromosomes smc3 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | structural maintenance of chromosomes smc3 [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0008278 cohesin complex GO:0007062 sister chromatid cohesion GO:0005515 protein binding GO:0005524 ATP binding |
| InterPro families | IPR010935 SMCs flexible hinge IPR009053 Prefoldin IPR003395 RecF/RecN/SMC |
| Orthology group | MCL12573 |
Nucleotide sequence:
ATGCATATTAAACAGGTGATTATTCAAGGGTTTAAGAGTTATCGTGAACAGATAGTGGTA
GAACCCTTTGATAAACGGCACAATGTAGTTGTTGGACGTAATGGTTCCGGAAAAAGTAAT
TTCTTCCATGCTATCCAGTTTGTACTTAGCGATGAGTTCTCTCATCTCAGGCCGGAGCAA
CGTCTGGCGCTACTACATGAAGGCACTGGACCTCGGGTGATATCAGCTTTTGTTGAAATC
ATTTTTGACAACTCTGATAATCGAATTCCAATTGAAAAGGATGAGATTTTCCTCCGACGA
GTCATTGGTTCTAAGAAAGATCAATTTTTTCTGAATAAGAAAGTTGTGCCAAGATCAGAA
GTACTAAATCTACTGGAAAGCGCTGGTCTCTCCAACTCTAATCCATATTACATTGTGAAA
CAAGGAAAGATTAATCAAATGGCAGTAGCCCCTGATTCGCACAGATTGAAATTGTTAAGA
GAAGTAGCTGGTACAAGGGTTTACGATGAGAGGAGAGAGGAATCTGTTACCATATTGAAA
GAAACTGTCGGGAAGGTTGAAAAAATTAACGATTTCCTCCAAACCATTGAAGAGAGGCTG
AAAACGCTTGAAGAGGAGAAAGAGGAATTGAAAGAATATCAGAAATGGGATCGCGCAAGA
CGTGTCCTTGAGTTTATAATACATGACACAGAACACAGAGAAAACAAACGGAAACTGGAA
GATTTAGAGAAAATGCGTGCCAACAGTGGCAAAGAACAACAACATTATGCCGACATGGTG
AGAGAGGCTCAAGATCATGTGAGAGAAGCCAACAGAAAACTAAAAGAAGCCAGAAAAGAT
GTGGCAGCAACTCGTGAAGAGAAGGACATACTTTCAACTGAACAACAGCAGTTATTGAGA
GAAAAGACGAAGCTCGAGCTCGCCATCAAAGACTTGACAGACGATGTTGACGGAGATAAC
AAGTCTAAGGGTTTGAGAGGCACTGATCACAGCAGAATCGCCTTGCGGGCCTGTGGCTCA
GCAGAAGAGCGGCGCGTGGGACAACCCGAAAGAGCGGAAGCTGAGCTGGAGCGTCTCCGT
CAGCAGATTTCGGAGAAAGAACGCGAATTAGAGGAACTGAAGCCCAAGTACGAGGAGATG
AAGGCGCGGGAGGAAGAATGTACGCGAGCGCTCGCCCTGAACCAACAGAAACGACAAGAG
CTATACGCCAAGCAAGGCCGCGGCACACAGTTTACATCCAAACAAGACAGAGATCGATGG
ATAGAGAAAGAGCTCAAATCACTGAACAAACAAATAAAAGACAAGAAGGACCACGAGAAC
AAACTACGCGAGGATCTGAGGAGGGACGCGACAAAGCTGACGGAACTGGAGAAGAGAATC
GAAGAAATGACTAAGGAAATGGAACGACAAAGGGTCGCCATCGACGAACACAACAAGCAG
TACTACGAGTGTAAGAAGAAAAAGGATCAGGAACAAAGCACTAGGAACGAGTTATGGCGT
AAGGAGACCACATTAACTCAGAATTTGTCTTCCTTAAAAGAAGATCTATCTAAAGCCGAT
CAAGCGCTTCGCTCCATGGCTGGAAAGCCCATACTAAACGGCCGAGACAGTGTTAGGAAA
GTTCTAGAAACTTTCCAAGAACGTGGCGGAGAGTGGGCCAAGATAGCCACACAATACTAT
GGCCCCGTTATAGAAAACTTTAGCTGCGACAAAACTATATACACAGCTGTTGAGGTTACA
GCCGGCAACAGACTGTTCCATCATATAGTGGAGTCGGACACCGTCGGTACTAAAATATTA
AAGGAGATGAATCGTCAAAGCCTCCCCGGCGAGGTGACCTTCATGCCCCTCAATAGACTA
CAAGTCAGGGACATGGTTTATCCTAATGATAACAACGCCATAGCCATGGTTCAGAAATTG
AAGTATGATCCGAAGTATGCAAAGGCTATGAAGTATATCTTCGGTAAGACGCTTATATGC
AGGAACTTGGAGTGTGCCACCGAGCTCGGGAAACAGTTTCACCTGGACTGTGTCACTCTA
GAGGGGGATCAGGTATCATCGAAAGGGTCACTCACTGGTGGATATTTTAATCAATCCCGA
TCCCGTCTGGAGATGCAGAAGACGAGATCGGAATTGATGGAGCAAATAACATCGCTGGAC
GAAGAGTTGAACACCTTGAGACAGGAACTCAATAAAACGGAGACCAGCATTAATACTATC
GTATCTGAAATGCAAAGGACTGAAACGAAACAGGGGAAGGCTAAAGATATATTTGACAAA
GTCAAAGCTGATATTCGTTTAATGAAGGAGGAGCTTGCGTCCATAGAACGATTCCGCGGA
CCTAAAGAAAGATCGTTGGCACAGTGTAGATCCAGTCTGGAAGCCATGCAGGCAACCAAG
GAAGGGCTCGAGTCAGAATTACACCAGGAACTCATGGAGCAGCTATCTATAGCTGATCAA
GGTAAGGTCGACGAACTGAACGACGCCATCAGACGTCTGACACAAGAGAACAAAGAGGCC
TTCAGTCAGAGAATGAACCTTGAAGCCACCAAGAACAAACTAGAAAACCTGCTCACTAAC
AACCTTATACGTCGTAAGGACGAGCTAGTACAAGCGCTTCAAGAGATCTCAGTGGAAGAT
CGCAAACGTCGTTTGGCGACAAGTAAGGCGGATCTCACCGGCGCTGAGAAAAGAATCAAA
CAGATCAATAAGGACCTCGAAGATGTCGAGAGAAAGGTCCAAGCCGCGGTCAAGACGGAA
AAGGCCCTCAAACTGGATCTAGACAAATGGAGGAATAAGGAGAAAGAAGCACAAGACAAA
ATGGAAGAAGATGCCAAGGGTCTGGAAAAGATGGCGTCCAAAGAAGTGTTATTACAAGAG
AAAATACAAGAGTCATTGGACAAAATAGCGGCCCTAGGAACCCTGCCTAACGCTCCCGAA
CTACATTCTAAGTACCAGAAACTATCTTTAAAACAGCTATTCAAAGAACTGGAGAAGGCC
AACCAACATCTCAAGAAATACAACCACGTGAATAAGAAAGCTTTGGATCAGTTTATAAGC
TTTTCGGAACAGAAAGAAAAACTGTACAAGAGGAAGGAGGAACTCGATATTGGTGGCGAA
AAGATCCGTGAGCTCATCGAGACGTTGGAACATAGGAAATTAGAAGCGATACAGTTCACG
TTCAAGCAAGTCAGCAAGAATTTCACTGAGGTGTTCAAAAAGTTGGTCCCTCAAGGCAGA
GGGAGTCTTATAATGAGAGTGGCGCCCGACGAGGGTCAAGATATACCGGATCGAGCTAAC
GCGGACCCGTTCACTGGCGTGGGTATCAAAGTATCGTTCACTGGAGGTGAAGGTGACATG
AGAGAAATGAACCAATTGTCCGGAGGTCAGAAGTCACTGGTCGCCCTAGCACTCATCTTC
GCCATACAGAAATGTGATCCAGCACCTTTCTACTTGTTCGACGAAATTGATCAGGCTCTA
GACGCTCAGCATCGTAAGGCGATCGCGAACATGATCCACGAGCTGTCGTCGTCGGCTCAG
TTCATAACGACAACTTTCCGTCCGGAGTTGTTGGAACACGCCCACAAGTTCTACGGAGTC
AAGTTCCGGAACAAAGTGTCGCACGTGGAGTGCGTCACGCGCGACGAGGCCAGGGACTTC
GTAGAGGACAGTGCTACGCACGCGTAG
Protein sequence:
MHIKQVIIQGFKSYREQIVVEPFDKRHNVVVGRNGSGKSNFFHAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRIPIEKDEIFLRRVIGSKKDQFFLNKKVVPRSE
VLNLLESAGLSNSNPYYIVKQGKINQMAVAPDSHRLKLLREVAGTRVYDERREESVTILK
ETVGKVEKINDFLQTIEERLKTLEEEKEELKEYQKWDRARRVLEFIIHDTEHRENKRKLE
DLEKMRANSGKEQQHYADMVREAQDHVREANRKLKEARKDVAATREEKDILSTEQQQLLR
EKTKLELAIKDLTDDVDGDNKSKGLRGTDHSRIALRACGSAEERRVGQPERAEAELERLR
QQISEKERELEELKPKYEEMKAREEECTRALALNQQKRQELYAKQGRGTQFTSKQDRDRW
IEKELKSLNKQIKDKKDHENKLREDLRRDATKLTELEKRIEEMTKEMERQRVAIDEHNKQ
YYECKKKKDQEQSTRNELWRKETTLTQNLSSLKEDLSKADQALRSMAGKPILNGRDSVRK
VLETFQERGGEWAKIATQYYGPVIENFSCDKTIYTAVEVTAGNRLFHHIVESDTVGTKIL
KEMNRQSLPGEVTFMPLNRLQVRDMVYPNDNNAIAMVQKLKYDPKYAKAMKYIFGKTLIC
RNLECATELGKQFHLDCVTLEGDQVSSKGSLTGGYFNQSRSRLEMQKTRSELMEQITSLD
EELNTLRQELNKTETSINTIVSEMQRTETKQGKAKDIFDKVKADIRLMKEELASIERFRG
PKERSLAQCRSSLEAMQATKEGLESELHQELMEQLSIADQGKVDELNDAIRRLTQENKEA
FSQRMNLEATKNKLENLLTNNLIRRKDELVQALQEISVEDRKRRLATSKADLTGAEKRIK
QINKDLEDVERKVQAAVKTEKALKLDLDKWRNKEKEAQDKMEEDAKGLEKMASKEVLLQE
KIQESLDKIAALGTLPNAPELHSKYQKLSLKQLFKELEKANQHLKKYNHVNKKALDQFIS
FSEQKEKLYKRKEELDIGGEKIRELIETLEHRKLEAIQFTFKQVSKNFTEVFKKLVPQGR
GSLIMRVAPDEGQDIPDRANADPFTGVGIKVSFTGGEGDMREMNQLSGGQKSLVALALIF
AIQKCDPAPFYLFDEIDQALDAQHRKAIANMIHELSSSAQFITTTFRPELLEHAHKFYGV
KFRNKVSHVECVTRDEARDFVEDSATHA