| New model in OGS2.0 | DPOGS214363 |
|---|---|
| Genomic Position | scaffold768:+ 5393-8326 |
| See gene structure | |
| CDS Length | 1485 |
| Paired RNAseq reads | 1215 |
| Single RNAseq reads | 3302 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003977 (0.0) |
| Best Drosophila hit | CG17259 (0.0) |
| Best Human hit | seryl-tRNA synthetase, cytoplasmic (0.0) |
| Best NR hit (blastp) | GF15510 [Drosophila ananassae] (0.0) |
| Best NR hit (blastx) | seryl-tRNA synthetase [Aedes aegypti] (0.0) |
| GeneOntology terms | GO:0004828 serine-tRNA ligase activity GO:0006434 seryl-tRNA aminoacylation GO:0005737 cytoplasm GO:0005524 ATP binding GO:0007040 lysosome organization |
| InterPro families | IPR002317 Seryl-tRNA synthetase, class IIa IPR010978 tRNA-binding arm IPR015866 Seryl-tRNA synthetase, class IIa, N-terminal IPR006195 Aminoacyl-tRNA synthetase, class II IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain |
| Orthology group | MCL14124 |
Nucleotide sequence:
ATGGTGTTAGATCTAGACCTTTTTCGTGCCGATAAAGATGGGGATCCTGAAAAAATTCGC
GAAAACCAACGGAAACGTTTCAAAGACGTTGCTTTAGTGGACACTGTAGTGGAACAAGAT
ACCTTATGGAGAAAATTACGCCACGATGCCGACAACCTAAACAAACTGAAAAACGTATGT
AGTAAAGAGATTGGCCAAAAGATGAAGAGTAAAGAACCCGTTGGCGCTGAAGATGAGGCC
GTACCTCAAGAAATCGCTGATAACCTTATTTATCTTACCGGTGAACAATTGCGACCTCTC
ACCGTCAATCAAATTAAAAAGGTTAGAGTAATGATTGATGAAGCAATTATGAAAAATGAG
CAAGCATTGGTAGCAGCAGAAAAGACTCGATCTGCTGCACTTAGAGAAGTAGGCAACCAT
TTACATGAGTCTGTGCCTGTTGATGATGACGAGGATCATAATGCTGTGGAAAGGACGTTT
GGAGACTGTAGCTTTAGACAAAAATATTCTCATGTAGATCTTATATGCATGATCGATGGA
ATGGATGGAGAAAGAGGTGCAGCTGTGTCCGGGGGCAGGGGATATTACCTGAAGGGTCCA
GCTGTATTCCTTGAACAGGCTCTAGTGCAACTTTCTCTTAGAATGCTTTTAGAGAGAGGT
TATACACCATTATATACACCATTTTTTATGAAAAAAGAGGTAATGCAAGAGGTTGCACAA
CTTGCACAATTTGATGAAGAGCTTTACAAGGTCATTGGCAAAGGTTCAGAAAACAAAGGT
GATAGTGCTGTAGAGGAAAAATATCTCATAGCTACTTCAGAGCAGCCCATTGCTGCCTAC
CACAGAGATGAATGGCTTCCGGAAGCATCTTTACCTATTAAATATGCAGGTCTATCCACA
TGTTTCCGACAGGAAGTGGGTTCACATGGTCGAGACACCCGTGGTATCTTTAGAGTTCAT
CAATTTGAAAAGGTAGAGCAGTTTGTTCTTACCTCTCCCCATGATAATGCCTCATGGGTA
ATGATGGAGGAGATGATAAAAAACGCAGAGGACTTTTACCAGAGCCTTGGTATTCCATAC
CGAGTCGTCAATATAGTGTCGGGAGCTCTAAATCACGCAGCTTCTAAGAAGCTGGACTTG
GAGGCATGGTTCCCTGGCTCTGGAGCATTTCGTGAACTTGTATCATGTAGCAACTGTCTG
GAGTATCAAGCTAGACGTTTACTTGTTAGATACGGCCAAACAAAGAAAATGAATGCAGCA
ACTGAATATGTCCACATGCTTAATGCCACAATGTGCGCCACCACACGCGTCATCTGCGCT
ATCTTAGAGGTCAACCAGACAGAGGAGGGTGTTAAGGTGCCCGAGGCCCTCAAACTCTGG
ATGCCAGAACAGTATCAAGAATTAATTCCATTTGTTAAGCCCGCACCCATAGACCTAGAG
GCTGCAGCTTCTGCCAAGAAAGGCAAGAAGAATGACAAGAAATAG
Protein sequence:
MVLDLDLFRADKDGDPEKIRENQRKRFKDVALVDTVVEQDTLWRKLRHDADNLNKLKNVC
SKEIGQKMKSKEPVGAEDEAVPQEIADNLIYLTGEQLRPLTVNQIKKVRVMIDEAIMKNE
QALVAAEKTRSAALREVGNHLHESVPVDDDEDHNAVERTFGDCSFRQKYSHVDLICMIDG
MDGERGAAVSGGRGYYLKGPAVFLEQALVQLSLRMLLERGYTPLYTPFFMKKEVMQEVAQ
LAQFDEELYKVIGKGSENKGDSAVEEKYLIATSEQPIAAYHRDEWLPEASLPIKYAGLST
CFRQEVGSHGRDTRGIFRVHQFEKVEQFVLTSPHDNASWVMMEEMIKNAEDFYQSLGIPY
RVVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLEYQARRLLVRYGQTKKMNAA
TEYVHMLNATMCATTRVICAILEVNQTEEGVKVPEALKLWMPEQYQELIPFVKPAPIDLE
AAASAKKGKKNDKK