New model in OGS2.0 | DPOGS200286  |
---|---|
Genomic Position | scaffold1093:- 25654-26742 |
See gene structure | |
CDS Length | 1089 |
Paired RNAseq reads   | 1113 |
Single RNAseq reads   | 3634 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005560 (1e-148) |
Best Drosophila hit   | proteasome 54kD subunit (1e-99) |
Best Human hit | 26S proteasome non-ATPase regulatory subunit 4 (2e-99) |
Best NR hit (blastp)   | putative proteasome 26S non ATPase subunit 4 [Heliconius melpomene] (0.0) |
Best NR hit (blastx)   | putative proteasome 26S non ATPase subunit 4 [Heliconius melpomene] (4e-158) |
GeneOntology terms    | GO:0000502 proteasome complex GO:0005515 protein binding GO:0005737 cytoplasm GO:0031145 anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0042044 fluid transport GO:0051436 negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO:0051437 positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle |
InterPro families    | IPR002035 von Willebrand factor, type A IPR003903 Ubiquitin interacting motif IPR007198 Ssl1-like |
Orthology group | MCL12260 |
Nucleotide sequence:
ATGGTCTTGGAAAGTACTATGATTTGTGTAGACAACAGTGATTACATGAGAAATGGAGAT
TTTCTTCCAACAAGACTGCAAGCTCAGCAAGATGCTGTTAATTTAGTGTGTCATTCCAAA
ACACGGTCTAATCCGGAAAATAATGTTGGTTTACTGACTTTGGCCAATGTGGAAGTACTG
GCCACTTTAACTAGCGACGTTGGCAGAATACTCTCAAAGCTTCACCGTGTTCAACCCAAT
GGGGACATCAATATACTTACTGGTATAAGGATTGCACATCTGGCTTTAAAACACCGACAG
GGAAAAAATCATAAAATGCGTATTGTTGTCTTTGTTGGCTCTCCTATTAATACCGATGAG
AAGGAACTGGTGAAATTGGCTAAAAGACTCAAAAAAGAGAAGGTTACTTGTGATGTTGTA
TCATTTGGTGAGGATTCTGAGAATAATCCCCTATTGACTACATTTATAAACACATTGAAT
GGTAAGGATAATACATCTGGAGGCAGTCATCTTGTCTCAGTTCCAGCTGGTGGATGTGTT
GTACTTTCTGAAGCATTGATCTCTAGTCCAATAATTGGTGGAGATGGTGCTGGCCCTTCT
GGCTCAGGCTTATCACCATTCGAGTTTGGTGTAGATCCTAATGAAGATCCTGAGCTCGCC
TTAGCTTTAAGAGTGTCCATGGAAGAGCAACGACAGAGGCAAGAAGAAGAGTCCCGTCGT
CAACAAACAAATGCTGAAGGCGAAGCTGGAAAAACTGGAGAGCCTCAAAACACTGGCATG
GAAAGGGCTCTAGCAATGTCATTGGGGAGAGAAGCCATGGAGTTATCGGAGGAGGAACAG
ATTGCTCTAGCTATGCAGATGAGCATGCAGCAAGATGCACCACAAGCTGAAGAGAGTATG
GATGTGTCAGAAGAATATGCTGAGGTTATGAACGATCCTGCATTCCTGCAAAGCGTGCTT
GAGAACCTACCTGGAGTAGATCCACAAAGTGAAGCAATTCGTAATGCCATGTCAACTATT
AAGAAAGATAAAGATGAAAAAGATGATAAGGATCAGAAGGACAAAGATGGTAATGGGCCA
AGCTCTTAA
Protein sequence:
MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVL
ATLTSDVGRILSKLHRVQPNGDINILTGIRIAHLALKHRQGKNHKMRIVVFVGSPINTDE
KELVKLAKRLKKEKVTCDVVSFGEDSENNPLLTTFINTLNGKDNTSGGSHLVSVPAGGCV
VLSEALISSPIIGGDGAGPSGSGLSPFEFGVDPNEDPELALALRVSMEEQRQRQEEESRR
QQTNAEGEAGKTGEPQNTGMERALAMSLGREAMELSEEEQIALAMQMSMQQDAPQAEESM
DVSEEYAEVMNDPAFLQSVLENLPGVDPQSEAIRNAMSTIKKDKDEKDDKDQKDKDGNGP
SS