| New model in OGS2.0 | DPOGS205122 |
|---|---|
| Genomic Position | scaffold1605:- 20438-34330 |
| See gene structure | |
| CDS Length | 4017 |
| Paired RNAseq reads | 4419 |
| Single RNAseq reads | 10631 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011198 (1e-58) |
| Best Drosophila hit | pollux, isoform A (0.0) |
| Best Human hit | TBC1 domain family member 1 (5e-90) |
| Best NR hit (blastp) | PREDICTED: similar to pollux CG1093-PA, isoform A [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to pollux CG1093-PA, isoform A [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0033627 cell adhesion mediated by integrin GO:0009986 cell surface GO:0005178 integrin binding GO:0005622 intracellular GO:0005097 Rab GTPase activator activity GO:0032313 regulation of Rab GTPase activity |
| InterPro families | IPR006020 Phosphotyrosine interaction domain IPR000195 Rab-GAP/TBC domain IPR021785 Protein of unknown function DUF3350 IPR011993 Pleckstrin homology-type |
| Orthology group | MCL11588 |
Nucleotide sequence:
ATGCATCCGAACCGTCCTATGTTCGGTTCCCACTCGGACACATCCGCTATAAACATGAAA
AATTTGGTGACAGATTTATTCAGTCAGATGCGGGATCCTTCACCAGGGACCCAGAGTCCT
AAGGGCTCAACTGGGTCCCTCAACGTCACTAGGAACGTAGGATTCCAGCTGCAGAATGGA
TCTGAACACCTTCCTTGGAGTAACCCCGCTATATCTTTACCTGGAAATTGCAATTCTAAT
TTGACAAACGAATCTGGACTTGTTAGAAGTTTGAGCAACGCTTCAGCACTAACATCACTA
TGCGCTGATTTATCTCCGTCTGATTCACATTTTTTTGAGGTTTTATACATCGGAAAACAC
GAGGCTGAGAAAGCAAGGACTAGCAGACGGCACAGTTTGTTGTCTTCCAGTGGGGTTTCC
CAGGATAGTAATGATTCGTCAAGAACATCACCCGAAAAGGCTTTAGAGGAATTTAGAAAA
ACCAACTACATAATGCCAAGTAGCACACCATTAGAGCCAGATAAGAATGTTGCTTGGAAA
AGTGCTGAGAATCTTAAAAAACAAGAAAGCAGTGAGGTTGATGAGGAATTTGATGTATTT
ACCAAAGAAAGAGTTGAGAGTGTCAAAAAGATGGTACCTTTGGAACCGGCTGTAGTTGTT
ATAAATGTGACAAAAAATAATTTGGGCACCGTAACTGAGGATGAAGAGAAACAGGACAAC
ATAGATGGCAATGATGCTGCCAAGACAGGGAAGGATACCGATCCTCCTAAAGAGAACGAT
CTTGTAAATAACAAATTAGCTGATCCACTGTTAAATAAACCTTTGGAAGTCACTAACAAA
CAATCAGACGAACAAACTAAGGTTGAGCAATTTAGTTTCGGTGAAATACCTAGGAAGCCG
AATAAAGAGAAAAAACAATTACCCGATAACAAGCCCTTCCTGAGAGACAGATCAGCTTCC
ATTGGTGCCTTGAGTTTGAAAACCCCGATCGCTCACTTGATCGGGGAACAGAATAGGACT
ATGCTATTTCAGGTTGCTAGATCAGAACTCCGTCTAATAAGTCCAGATAGGAAACAAATA
CTTTTACACAGAGCATTCAAAGATGTCGCTAGTTGTGTGCTAGGTAGGAGTAATAAAGAG
CACTTCGGATTCGTGTGTAGGGAGACTAACGAGAGCTACGCTTGTTACGTGTTCAAATGC
GAGAGTGACTCCGTCGCCAACGAAGTAGTCAGTGCGATCAAACAAGCGTTCGTAGCTCAC
GCTGAGTTGTTAAAAAAATCACGGGACAAATCCCCTAACATGACCTGCGAACACTGTCCG
ATGTTGTGGTACCACAGACTGTGTCATGATATTGAAGGTATGAACGAAAAAAAGACCCAC
GCGTTCATACTCCGTCGCATAGAACAGCTGCCTGATGATGAACAGGAAATCATCATCACG
AAGTATCAAGGTGGAACTAACCACATGTATGAGGTGAGCGAACACAACGCTTTCTTAATG
ATGTTGTTGAGAGCTCACTGCGAGTCCAAACAGAAAAGACATGTACACGACACGGCTGAG
AACAGGTCGGAGTTCCTCAATCAATATCTCGGAGGTAGCACAATATTTATGAAAGCAAAG
CGTTCTCTGTCGAGTGGTTTCGATCATCTGCTGAAGAGGAGACAGAGCAAGGATGAAGGG
AATCTACTGCAACTCCCGCGGAAGGATATTTCTCTGAGTCCAGCCCGACCGAGTTCAGAG
TCGGATCATCCTGAGTCACCGGACAACCAGAGGAAAGCAACCTCACCTGGTTACGAACCA
CCAGCTACGAAAGAAATTGTTACGCCAGACGACACAAATGATAACAAAGAAGACTCAAAA
GCTGTCAATAGTCCCATGATGGACATCTTCCTAAAAGTGAGCGACAGTCGCACATCAGCT
GCCGGAAATAACGAAAAAGATTCAACATGGCGCCAGGCGATATATGAGAAAGTTCTACAA
CCGAACATAGAACAAGAAGATCTCAGTCAATCAAACCAACGGCCGTCACGGACGACGAGA
CGGTCGAGAGAAGAATTGAGACAGCTGTGGAAGATGGCCATCGACCAGACGGTGCTGCTG
GTGAGGATGGAAAAAGAAAACCAGAGACTGAGAGAGGGCGAGGAATCATCGGCTGTTCGG
CGCATAAAGCTAGAATACACTGAGCTTGACACTTGTGCTCCCGGCGTGTCGCTCATGTGG
GACGACCTGTTGTCCCGAGACAGATCTCACCCGGTCGCCAAAATAGATAGACACATGCTC
ACGCAGGCTGTGAGACAAGGCGTTCCTCGCATGTCTAGAGGCGGCGTCTGGTACATCCTG
GCTGAACAAGCCTGCATCCGGATCCCTCCGCCGGATGTCAAACAGTTTCCGTTATACAAC
ACGCCGTACGCCACACTATTATCTGGTCTCACTAAACACCAACACGCCATTTTGATTGAC
CTCGGCAGGACGTTCCCAAAGCATTCCTACTTCGCATCAGCCCTGGGTCCAGGTCAGCTG
GCCCTGTACAATATACTGAAGGCGTACTCCCTGTTGGACCCCGATGTGGGCTACTGCCAG
GGACTGAGCTTTGTGGCTGGGATACTCTTACTACATATGGAAGAAGCGGAGGCGTTTGCT
CTTCTTCGTCATCTGATGTTCCGACGCGGGATCAGAAAACAATATCTGCCAGACATGAAC
GCGCTCCAGGTTCAGCTGTACCAGCTGTCGCGGCTGGTCCGTGACCGCGAGCCAGAACTC
CACCGTCACCTGGAAGCGCTGGATATTTCACCAGCTCTGTACGCCGCACCATGGATGCTT
ACGCTCTTCACCAGCCAGTTCCCTCTCGGTTTCGTTGTGAGGGTGTTCGATCTCATATTT
TTGGAGTCATTCGACGTGGTCTTTTCGCTATCCCTGAGTCTACTGTCGGTGCACAAAGAC
GGTCTCATGCTGTGTGAAAGTTGCGAAGAAGCTGCCGAATATCTGAAGCACAAGTTACCC
GACATGAACAAAGGAGTGTACGACAAGGTCATGAAAATGGTCGCCAAGCTGGACATAAGC
CGTCAGCTGACAGAGTATGAAGTGGAATACAGCGTGCTGAGAGAGGAAATGCCTCGTCTG
GCGCTACTCACGGAACAGAACAGACAGCTGGTGAATAGTACGGCCAGGATGAAGGAGGAG
ATCGATTCCGCAATGAACGCTATAGAAAACTATCAGAAAACGCAGACGAACCTCGAAAAC
CAGAACAAGACGATGGAACAACACCTGACTCTACTGAGCCGCTACATCTCCGCCCACAAA
CAGGACCTGCCGCCCGAGATAAGGAGAATAGCCAACGTGTACTGCAAAAAACTGTCGTTC
GGCTCAAAAATCATCACCAAATTCACTTCCAACGATGACGACGGGGACAAAAAGAGTTAC
AAACAAGGGATCAGCGCCCCGGACCTGTTCGCTAAAACCAGCAGGGAGGAGGTTCTGGAC
GCGATGAAAAATGACGAGAGGAGGTCTATCAAGAAATCGCAATCCGTGCATCTGCTCGTC
CAAAAACATTATCCGCTAAAGGTCCTCGAAGAAAAAACAGAAACACCAAAGAGAGACAGT
TTGAGAATTGAGAACATAGCCAACGAGACGATAAGAGATTTAGGGAAAAGGACCTCCGGG
TACATAAACGACAGTCACGAACAGATACAGCAAGAGAGGTTGTTCGAGAGGCAGCTGAAG
CACGACTTCGACGAGAACTTACGGAAACTAGACGAGAAATTAACGACGAAATCATATCTG
GACGACATCAGTATTTTCCAGAGCAAGAAGTCCATGTCTCTGAACCTGAGGCCCAAAGAG
GAGAAGACTGACAGCGGGTTCGTGACGCCCATGAGCCCAGCAGACAACAGGAACGACAGC
AGTTCACTGACCTCTCACCCGTTGAGCGACTGCGATGTGGACATCAAATTTGACGGACAA
CTCACCAAGCTGAAACAAATCCGACCGTTCAGGAACAGTAGTCTGTATAACCAATGA
Protein sequence:
MHPNRPMFGSHSDTSAINMKNLVTDLFSQMRDPSPGTQSPKGSTGSLNVTRNVGFQLQNG
SEHLPWSNPAISLPGNCNSNLTNESGLVRSLSNASALTSLCADLSPSDSHFFEVLYIGKH
EAEKARTSRRHSLLSSSGVSQDSNDSSRTSPEKALEEFRKTNYIMPSSTPLEPDKNVAWK
SAENLKKQESSEVDEEFDVFTKERVESVKKMVPLEPAVVVINVTKNNLGTVTEDEEKQDN
IDGNDAAKTGKDTDPPKENDLVNNKLADPLLNKPLEVTNKQSDEQTKVEQFSFGEIPRKP
NKEKKQLPDNKPFLRDRSASIGALSLKTPIAHLIGEQNRTMLFQVARSELRLISPDRKQI
LLHRAFKDVASCVLGRSNKEHFGFVCRETNESYACYVFKCESDSVANEVVSAIKQAFVAH
AELLKKSRDKSPNMTCEHCPMLWYHRLCHDIEGMNEKKTHAFILRRIEQLPDDEQEIIIT
KYQGGTNHMYEVSEHNAFLMMLLRAHCESKQKRHVHDTAENRSEFLNQYLGGSTIFMKAK
RSLSSGFDHLLKRRQSKDEGNLLQLPRKDISLSPARPSSESDHPESPDNQRKATSPGYEP
PATKEIVTPDDTNDNKEDSKAVNSPMMDIFLKVSDSRTSAAGNNEKDSTWRQAIYEKVLQ
PNIEQEDLSQSNQRPSRTTRRSREELRQLWKMAIDQTVLLVRMEKENQRLREGEESSAVR
RIKLEYTELDTCAPGVSLMWDDLLSRDRSHPVAKIDRHMLTQAVRQGVPRMSRGGVWYIL
AEQACIRIPPPDVKQFPLYNTPYATLLSGLTKHQHAILIDLGRTFPKHSYFASALGPGQL
ALYNILKAYSLLDPDVGYCQGLSFVAGILLLHMEEAEAFALLRHLMFRRGIRKQYLPDMN
ALQVQLYQLSRLVRDREPELHRHLEALDISPALYAAPWMLTLFTSQFPLGFVVRVFDLIF
LESFDVVFSLSLSLLSVHKDGLMLCESCEEAAEYLKHKLPDMNKGVYDKVMKMVAKLDIS
RQLTEYEVEYSVLREEMPRLALLTEQNRQLVNSTARMKEEIDSAMNAIENYQKTQTNLEN
QNKTMEQHLTLLSRYISAHKQDLPPEIRRIANVYCKKLSFGSKIITKFTSNDDDGDKKSY
KQGISAPDLFAKTSREEVLDAMKNDERRSIKKSQSVHLLVQKHYPLKVLEEKTETPKRDS
LRIENIANETIRDLGKRTSGYINDSHEQIQQERLFERQLKHDFDENLRKLDEKLTTKSYL
DDISIFQSKKSMSLNLRPKEEKTDSGFVTPMSPADNRNDSSSLTSHPLSDCDVDIKFDGQ
LTKLKQIRPFRNSSLYNQ