| New model in OGS2.0 | DPOGS214406 |
|---|---|
| Genomic Position | scaffold1329:+ 15999-29083 |
| See gene structure | |
| CDS Length | 2403 |
| Paired RNAseq reads | 2255 |
| Single RNAseq reads | 5973 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011380 (4e-112) |
| Best Drosophila hit | second mitotic wave missing, isoform B (3e-31) |
| Best Human hit | RNA-binding protein 27 (6e-22) |
| Best NR hit (blastp) | PREDICTED: similar to cutaneous T-cell lymphoma tumor antigen se70-2 [Apis mellifera] (8e-97) |
| Best NR hit (blastx) | PREDICTED: similar to cutaneous T-cell lymphoma tumor antigen se70-2 [Apis mellifera] (3e-82) |
| GeneOntology terms | GO:0005634 nucleus GO:0007346 regulation of mitotic cell cycle GO:0008270 zinc ion binding GO:0000166 nucleotide binding GO:0003676 nucleic acid binding GO:0006397 mRNA processing GO:0045879 negative regulation of smoothened signaling pathway |
| InterPro families | IPR000504 RNA recognition motif domain IPR000571 Zinc finger, CCCH-type IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL13782 |
Nucleotide sequence:
ATGCTGTTTAAGTCTCTCGAGAGTCAGGAGTACTTGAAGCCGTCAGCGGAGTCCCGCGAG
CCCCGCGAGCCGTCACCGCAGCCCGAGCAAACAGAACCCGACAAACAGCCTGAACAAGAG
AACCATGTGTCAACAGCCCCTACCACGGTTGTGGAGAAGCCGCCAATGCGTCGCTCACCT
CCTCATAGAGTGGTGGTTCCTCGACTGAGAGTTGTAGGTGTCGTGCTCGTCTGTCTCGTG
AAGAGGGAGAGGAAAAAGTGGGAAAGAAAGCGCAACCGTCTCTCTCACTCATCGGACGAA
ACAGCCATTAAAGACTACTTCACGCCGCTCTTCTGTGAGAGGATAGTGCTACCGACGGAA
CTTCTAGAAGAGCCTGTAGATGCACCTAGACGGAGGGACAGGAGAAATGATTCTTTTGAC
GTATTTTTGTCCGTGCGCTATTTCTTCTGGCCCGTCGTCGTAGATCTAGGTCGTGGGAGC
GGAGAGCTAGACGAAGGTGCGCTAGACGCTCGTCCCGCTCTCCGTCGCCCCGCGGCCGTT
ACCGAAACAGAAGCCCGCCGACGCTCGATCGCCACGGTTCCAGATCACGGTATACTATCA
TACTCACAATCGAGATCGCCGGTCCCGATCAGGGACAGAGAGTTGGAGAGGGAGAGAGAC
AGAATGAGACCGCTGAGGGAGATGGACAGAGATAGGATGTCAAGGGATAGAGAGCACAGG
GACAGGATCACCCGCTCCAGGGATAGAGAACGGTCTAGGGAAAGGTCGATATCACCTCAT
GAAACCAGGATCGAGCATGCCGATGTGTTTAAGAGAAGGTGCAGAGACTTTGATGTGAAG
GGCTACTGTATGCGTGGAGACCTCTGCGAGTGGGACCACGGCGCGGACCCTGTCGTGTTG
GAAGACGCCGCCCTCACCAGGGTACTGGCTGGACCTCCTGCACTCGCTGAATACAATCCC
GCCGCTCCGGACATCTGGTCTGGCGGAGTGGTGGGCGCTTTCCCCCCTCCACCGCCGCCC
CACCACCTCGCCCCCCGGGAACTGGTGCCCATACCACGTGTTCGTCACGAGCCGCCAATG
GGAGCAGCTATGCCCCCTCCACCAAGACATCCCCCTCCACCCAAAAAGACGTTTGAATAC
AACAGATTAGGTCCGCCACGGCCGTTCCAGTCCAACGCGAACTGTTCCTTGGAAGTGAAG
AAAGTACCTCGCGGCTTGAACGACATAACACATCTGAACAATCACTTCTGTAAATTCGGC
AAAATTGTTAACATACAGGTCTGTTTTGAGGGGGATCCAGAAGCGGCTCTTATAACGTTC
TCGAATCCCACCGAGGCCAATGTCGCGTACAAGAGTACGGAGGCTGTGCTGAATAATAGA
TTCATTAAAGTGTTTTGGCACAACCCTGAGAATAAACAAGAGAATACAGCACCACCGGGA
CAACAGGCGCACAAACAGACGGACAGACAGAATTCACATCCAATGTCACACAACAAGGTG
CTCATCAACAAAGAAAACATGAAAGCGACAGCTGACAACAAAACTGTTGAGAAGAATACC
AAAGAACAGTCTAACGGTAATGATGCACCGGCTCCTCGTCCGAATCCTCGCCAGCTATCA
GAGCATCACCGACGCGCCCAGGAACTGCTCCAATCACAGCTGAGGCAGCAGCGGTTGATG
ATTGAGAAGCTCGAGGCTGGAGGTTTATCAGATCAACAGAGGACAGCTCTCATGGACGCC
ATCAAGGCGTCCCATGACGGTATAGAGAAGCTGAGGGAACAACTCGTCGCTTACAACGGA
ATGAGAGCACAGATGCAGGCTAACGTCAAGAAACCGAAAACGGCCCAGGAGGCGCAGAAG
GAGATCCTGGACGCGGAGCTGGACATCATAACCAAACAACAGGAGGGCCAGGACGTGTCG
GAGTTGTCGCAGCGCATAGCGGCGCTGAGGAGGGCGGCGGCGGCCCTCGCGCCGAGGAGG
ACCAATAGGGGGGGTCGCTTCAACCCGGCCATGCGTTTCTCGCGGGCGTCCAAGGTGTTC
AGCGTCAACCAGTCTGTGGACCATCGGCCGCGGGCGCTGCTCGTGTCCGGCTTCGAGCCC
GACGAGCTCGACGCCCTGCTGGCGCACTTCGCGCAATTCGGCGAGATCACCGGTAAGGAG
GTGAACCTGTCCGTGCCGGAGCTGGTGGTGCAGTACCGGGCGAGGCAGCACGCCGAGCAC
GCCTTGCACGCCGCCAGGAACTACAGCGACAGAACGCTCTCGATCACGTGGGTAACGAAC
AGCAAGCCCATCGCAGCGCCCGCCCTCAACGGAGATTCATCTCACGAGATAAAGGACGTC
ACGAGACCAGCTCGTCTGGACGAGGACGAAGAGGACGAAGAGCATCGCTCGTGGAGACGC
TGA
Protein sequence:
MLFKSLESQEYLKPSAESREPREPSPQPEQTEPDKQPEQENHVSTAPTTVVEKPPMRRSP
PHRVVVPRLRVVGVVLVCLVKRERKKWERKRNRLSHSSDETAIKDYFTPLFCERIVLPTE
LLEEPVDAPRRRDRRNDSFDVFLSVRYFFWPVVVDLGRGSGELDEGALDARPALRRPAAV
TETEARRRSIATVPDHGILSYSQSRSPVPIRDRELERERDRMRPLREMDRDRMSRDREHR
DRITRSRDRERSRERSISPHETRIEHADVFKRRCRDFDVKGYCMRGDLCEWDHGADPVVL
EDAALTRVLAGPPALAEYNPAAPDIWSGGVVGAFPPPPPPHHLAPRELVPIPRVRHEPPM
GAAMPPPPRHPPPPKKTFEYNRLGPPRPFQSNANCSLEVKKVPRGLNDITHLNNHFCKFG
KIVNIQVCFEGDPEAALITFSNPTEANVAYKSTEAVLNNRFIKVFWHNPENKQENTAPPG
QQAHKQTDRQNSHPMSHNKVLINKENMKATADNKTVEKNTKEQSNGNDAPAPRPNPRQLS
EHHRRAQELLQSQLRQQRLMIEKLEAGGLSDQQRTALMDAIKASHDGIEKLREQLVAYNG
MRAQMQANVKKPKTAQEAQKEILDAELDIITKQQEGQDVSELSQRIAALRRAAAALAPRR
TNRGGRFNPAMRFSRASKVFSVNQSVDHRPRALLVSGFEPDELDALLAHFAQFGEITGKE
VNLSVPELVVQYRARQHAEHALHAARNYSDRTLSITWVTNSKPIAAPALNGDSSHEIKDV
TRPARLDEDEEDEEHRSWRR