| New model in OGS2.0 | DPOGS202782 |
|---|---|
| Genomic Position | scaffold892:- 57679-60013 |
| See gene structure | |
| CDS Length | 1614 |
| Paired RNAseq reads | 363 |
| Single RNAseq reads | 1074 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010461 (4e-154) |
| Best Drosophila hit | CG9514 (2e-68) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (4e-51) |
| Best NR hit (blastp) | putative ecdysone oxidase [Heliconius melpomene] (7e-106) |
| Best NR hit (blastx) | putative ecdysone oxidase [Heliconius melpomene] (7e-94) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0050660 FAD binding |
| InterPro families | IPR012132 Glucose-methanol-choline oxidoreductase IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal |
| Orthology group | MCL40536 |
Nucleotide sequence:
ATGGCCCACAGGCTAACTGAAGTGAAGAACTGGTCCGTGTTGCTGGTAGAAGCCGGGAAC
GATCCGCCCTACGTCTCGGAAGTTCCCGGTCTCGGAATACTACTAGGAGCTTCGTTCCCA
GATTGGAATTACTACACAAACGATGACACTGATGATGACACGAGACTACGGAGTGTTCAC
ATGATACAAGGAAAACTCGTAGGCGGGTCCAGCAGCGTGAATTATATGTATTACGTCAGA
GGCAATCCAGCCGACTACGACGACTGGGCGGCTCAGGGTAATGAAGGCTGGGCATGGAGT
GATGTCTTAAAGTATTTTAAAAAGAGTGAGAGACTAAATGACGATGAGATACTAAGCAGC
AACTCCAACGACCTGCACGGTGTCGACGGAAACATAGGAGTGACACGGTCGGTATGGGAC
AAACAAACCAAGAGGTATTTCGAAGCTTTCAGAGAAAATGGTCACGAGATTTTGTCGGAC
ACAAATGGCCACCAACAACTCGGATATTCGGTACCCAGTTTTACTATGGACAAATCGCGA
CGTCAGAGTGCCGCTGTTGCTTATTTAAGGCCAATCCTGAACCGTCCTAATATAAAAATA
CTCAAAGAAACTCTGGCGCGAAAATTAACTTTTGACGAGGATAGAAGAGTCACTGGAGTA
GAAATCAGGGATTCAGAAGGCTTAATTAAGACGGTGATAGCAAAGAAGGAAGTTATTCTA
TCAGCCGGAGCTGTTAAAAGTCCACAATTATTAATGATGTCTGGTATAGGACCACAAGCA
TATTTAGAGGAAATGGGAATCAATGTGGTTGTAAACAATCCTCACGTCGGGTCCAATCTA
CAAGATCACATGCTAGTACCAGTGGTGATATCTCTTGATAATGAAGAATCATCCATAACA
GAAAATTTCAGCTTTATAAGTAAACTAGGAACATTTCCCGCCCCAAATATTATGGGCCAC
GTTGCTCTAGACAAGAACCAAACTTTTCCAGACTACCAAGTCACCTCGATGCCACTCCCA
GTTGGAACCATGCTGCCATCTCTGGTCTGTAATAGTATATTTCAATGGAATAAAGAAGTG
TGCACGGCCCTAGCTGCCGCGGCGAGCCGAGACATGTTATTTGCATTAATTTCCTATCTT
CACCCCGAATCTAGAGGATATATTAAGTTGAAGAGCAACGACCCCGATCAACCGCCATTA
ATTTATCCTAAATACTTGTCAAAGAGAAACGACTTAAAGAAATTCTCTCGAAGCTTACAA
CACTTTACGAGCTTGATTAATACCACGTCTTGCAAAAAGCTTAATTCTGATATCGTCGAC
TTAAATGTTGGTAAATGTAAAGACAAACCTTTCGGCAGTCTGGAATACTGGGAATGCTAT
ATTTATAATCTAGTGACAACTCAGTACCACCCCGTCGGAACGTGTAGGATGGGACCAGAT
GGAGTCGTGGATGAGAGACTTCGAGTAAGAGGAGTCGAGGGTTTGAGGGTCGTGGACGCG
AGCATCATGCCTTCCATAACGAGCGGCAACACGTACGCCCCGACCGTCATGATCGCTGAA
AAGGCAGCTGACATGTTGAAAGTTGACAACGGTATTTGTGAAGACGTTCTGTAG
Protein sequence:
MAHRLTEVKNWSVLLVEAGNDPPYVSEVPGLGILLGASFPDWNYYTNDDTDDDTRLRSVH
MIQGKLVGGSSSVNYMYYVRGNPADYDDWAAQGNEGWAWSDVLKYFKKSERLNDDEILSS
NSNDLHGVDGNIGVTRSVWDKQTKRYFEAFRENGHEILSDTNGHQQLGYSVPSFTMDKSR
RQSAAVAYLRPILNRPNIKILKETLARKLTFDEDRRVTGVEIRDSEGLIKTVIAKKEVIL
SAGAVKSPQLLMMSGIGPQAYLEEMGINVVVNNPHVGSNLQDHMLVPVVISLDNEESSIT
ENFSFISKLGTFPAPNIMGHVALDKNQTFPDYQVTSMPLPVGTMLPSLVCNSIFQWNKEV
CTALAAAASRDMLFALISYLHPESRGYIKLKSNDPDQPPLIYPKYLSKRNDLKKFSRSLQ
HFTSLINTTSCKKLNSDIVDLNVGKCKDKPFGSLEYWECYIYNLVTTQYHPVGTCRMGPD
GVVDERLRVRGVEGLRVVDASIMPSITSGNTYAPTVMIAEKAADMLKVDNGICEDVL