| New model in OGS2.0 | DPOGS201859 |
|---|---|
| Genomic Position | scaffold414:+ 496-3683 |
| See gene structure | |
| CDS Length | 1245 |
| Paired RNAseq reads | 1098 |
| Single RNAseq reads | 2955 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006108 (2e-165) |
| Best Drosophila hit | CG9175, isoform B (9e-110) |
| Best Human hit | prolactin regulatory element-binding protein (2e-40) |
| Best NR hit (blastp) | prolactin regulatory binding-element protein [Bombyx mori] (1e-174) |
| Best NR hit (blastx) | prolactin regulatory binding-element protein [Bombyx mori] (1e-163) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding |
| InterPro families | IPR019775 WD40 repeat, conserved site IPR001680 WD40 repeat IPR019781 WD40 repeat, subgroup IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR011046 WD40 repeat-like-containing domain IPR015943 WD40/YVTN repeat-like-containing domain |
| Orthology group | MCL14913 |
Nucleotide sequence:
ATGTCTCGTAATAGATGTGATGGTTTACTTGCGAAAGTAGATTTTCCTCTTTATACACTC
CAGACCCTCACAGACCGTCATGTCCTCGTTGCAGGAGGCGGTGGGGCGTCAAATACAGGC
GTAGCAAATGGTTTCGAAATTTTCGAGTTATCCTACAATGGCACAAAATTCGTTGCCGAA
GAGGTGATGAGATATGAAACTGGTCCGAACGTCGTGATGACATGTTCCGTTCAGAACGTC
GAAGATCGTATCTATCTGGCGGCCGGTCAGGAGAGTCATTGTCAGTTGTATAAAGTCAAT
GTGCGGATGGTAGACCCAGCCGAGATGCGCCGCGGCAGCTTCAGGGCGGAGAACGGATTA
GTGCGTCGTCGACGGACAGTCTCAGAAAATGATAACATATCAAAAAATAGTGGCCCAGAG
AAAAGAATGTCTTTTGAAATAAGGCCATGTGACAGTGTACAAACTGATTTTGGTAAAGAT
CCCTTACAGAGGGTGGTAACTATCAGCCATGACGGTAAGCTGATGGCGACCGGAGGCGTC
GACGGCAAAGTTAGACTGTGGTCATTTCCAAAAATGCAACTATTATTTGAATTAAACGGT
CACACCAAAGAGCTGGACGACCTGGATTTCAGTCCGTGCAGTAAACAGTTGGTGAGTATC
GCCAAGGACGGGCTTCTATTGGTGTGGAACGCCAAGGCCGGGGGCGCTCCGCAGGTGAAG
CTGACCTGTCCCGAGACGCACGGCGGCCGGTACCTGTTCAGGAGGTGCAGGTTCGGAGCG
ATAGAAGACGTCCAGGGCAAGTATCGCATGTTCACGATCGCGAACCCCCTGACGCGCTCG
GGGAAGGCCCGCGGTCTGCTCCAGCAGTGGGAGCCGGTCAGCGGGCAGGTCTGCCGCACC
GTGGTCGTGGCCGAGTCGCTGTCCGCCCTGGCCGTCAGGGACGATGGGCGGTACGTGGGC
GTGGGCACCATGTTCACCGGATCGATACACATCTACGTGGCGTTCAGTTTACAGCGCGTG
TTGCACGTGTCGGGGGCTCACGGTATGTTCGTGACGGGCGTTCAATGGGCGCGCGCGGCG
TCTCTGCCACACTGCGAGGCCGCGCTACTCTCCATCTCCGTCGACAACCGCCTGGTTGTC
CACACGCTGCCCTCACCAGGGTCGATGCCGGCCTGGGTCGCTGTGCTCCTCATCGTCTTC
GTGTTGTTCTGCACCTTCTGCCTCTGTTCATATTTGGGAATCTAA
Protein sequence:
MSRNRCDGLLAKVDFPLYTLQTLTDRHVLVAGGGGASNTGVANGFEIFELSYNGTKFVAE
EVMRYETGPNVVMTCSVQNVEDRIYLAAGQESHCQLYKVNVRMVDPAEMRRGSFRAENGL
VRRRRTVSENDNISKNSGPEKRMSFEIRPCDSVQTDFGKDPLQRVVTISHDGKLMATGGV
DGKVRLWSFPKMQLLFELNGHTKELDDLDFSPCSKQLVSIAKDGLLLVWNAKAGGAPQVK
LTCPETHGGRYLFRRCRFGAIEDVQGKYRMFTIANPLTRSGKARGLLQQWEPVSGQVCRT
VVVAESLSALAVRDDGRYVGVGTMFTGSIHIYVAFSLQRVLHVSGAHGMFVTGVQWARAA
SLPHCEAALLSISVDNRLVVHTLPSPGSMPAWVAVLLIVFVLFCTFCLCSYLGI