| New model in OGS2.0 | DPOGS201860 |
|---|---|
| Genomic Position | scaffold414:+ 46363-47894 |
| See gene structure | |
| CDS Length | 573 |
| Paired RNAseq reads | 474 |
| Single RNAseq reads | 1554 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006109 (6e-47) |
| Best Drosophila hit | HP1b, isoform B (1e-26) |
| Best Human hit | chromobox protein homolog 1 (2e-29) |
| Best NR hit (blastp) | chromobox-like protein 5 [Bombyx mori] (7e-69) |
| Best NR hit (blastx) | chromobox-like protein 5 [Bombyx mori] (2e-58) |
| GeneOntology terms | GO:0005634 nucleus GO:0000785 chromatin GO:0003682 chromatin binding GO:0006333 chromatin assembly or disassembly |
| InterPro families | IPR000953 Chromo domain IPR018125 Chromo shadow, subgroup IPR008251 Chromo shadow IPR016197 Chromo domain-like IPR017984 Chromo domain subgroup |
| Orthology group | MCL40034 |
Nucleotide sequence:
ATGGGCAAAGATAAAAAGGATGAGACCAGTGAGGGTTCAAGTGAAGAAGAATATGTTGTT
GAAAAAGTCTTGAATAAAAGAACTGTCAAGGGGAAGGTCCAATATCTTTTAAAGTGGAAG
GGCTACAAAGAAGAGGAAAGCACTTGGGAACCGGAGGAACATTTAGACTGTGAAGAACTC
ATAAAGGCCTTTGAAAATAGCAGGAAAGAAAAAGAGGTGAAGGCAAAAAAATCGGAGGAA
CGAAGTAAAAAGCGTCGTCGTGATTCAAGTGACGATACGAGCACAACGGGAAAGATACGT
GAGGCCAGTGTGTCTTCGGTTGAGGAACAGAAAGAGGCACGCAAGGAGAAGAAAGATGAT
AAAAATAAGTCTGGCTTTGAAAAAGGCTTGAAAGCTGAGAAAATTATCGGAGCATCTGAT
GCCACCGGTGAACTAATGTTTTTAATAAAATGGGCCGACTCTGACGAAGCTGAATTAGTC
CCTTCAAAAGTTGCTAACATTAAGTGTCCCCAACAGGTTATAGCATTTTATGAAGAGCGA
CTGACATGGCACAGTCCAGCCGAGTCGGAGTGA
Protein sequence:
MGKDKKDETSEGSSEEEYVVEKVLNKRTVKGKVQYLLKWKGYKEEESTWEPEEHLDCEEL
IKAFENSRKEKEVKAKKSEERSKKRRRDSSDDTSTTGKIREASVSSVEEQKEARKEKKDD
KNKSGFEKGLKAEKIIGASDATGELMFLIKWADSDEAELVPSKVANIKCPQQVIAFYEER
LTWHSPAESE