| New model in OGS2.0 | DPOGS208572 |
|---|---|
| Genomic Position | scaffold1274:- 13883-19570 |
| See gene structure | |
| CDS Length | 3402 |
| Paired RNAseq reads | 984 |
| Single RNAseq reads | 2336 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010637 (0.0) |
| Best Drosophila hit | homolog of RecQ, isoform B (2e-152) |
| Best Human hit | ATP-dependent DNA helicase Q5 isoform 1 (5e-123) |
| Best NR hit (blastp) | DNA helicase recq5 [Aedes aegypti] (0.0) |
| Best NR hit (blastx) | GH16802 [Drosophila grimshawi] (6e-173) |
| GeneOntology terms | GO:0004003 ATP-dependent DNA helicase activity GO:0003678 DNA helicase activity GO:0004386 helicase activity GO:0017116 single-stranded DNA-dependent ATP-dependent DNA helicase activity GO:0003924 GTPase activity GO:0005525 GTP binding GO:0005524 ATP binding GO:0003676 nucleic acid binding GO:0006310 DNA recombination GO:0006974 response to DNA damage stimulus GO:0045930 negative regulation of mitotic cell cycle |
| InterPro families | IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR004589 DNA helicase, ATP-dependent, RecQ type |
| Orthology group | MCL12627 |
Nucleotide sequence:
ATGGATAACGTTACAGAAAAATTATTGCAATGTTTTGGTCACCGAAGGTTTAAAAGTGAA
TTGCAAGAGAGAGCAGTGCGAGCAATCGCGCGGGGAGTTCACGATGTCTTCGTTTCTATG
CCTACTGGTTCTGGAAAATCATTGTGTTTCCAATTGCCAGCGATGTTGCAGGAGAATAAG
GTCGCAGTCGTTTTCTCGCCTTTATTAGCTTTAATTAAGGATCAAGTCGATCATTTGACT
AAATTAAAAATCGCAGCCGAATCTATAAATTCTAAAATGACTCAAAAAGACAGAGAAAGA
GTTTTGAATGACCTTCGTAGTATGAAACCTAACACTAGGTTTCTATATGTAACACCGGAG
CAGGCAGCTACAGGTACATTTAAAGCGCTCATGGAACATCTCGTGAAGTATAAGAAGGTT
TCATATGTAGTGGTAGATGAGGCTCACTGTGTAAGTGAATGGGGTCATGACTTTAGACCC
GATTACCTTAAGTTAGGCAACCTGAGGGAAAAATTTAAAAGTATACCATGGGTCGCCCTC
ACTGCAACTGCCAGTGCCGAAGTAACTAAAGACATATTAGAAAATCTTAAGTTGCTAAAT
CCAGTTGCACAGTACAAAACTCCCAGTTTCAGAAGAAATTTATACTACGATGTTGTTTAT
CAGAATTGTATCCAGGATGAAATAGGAGACCTGGTGGAATTTTTAAAGAAAAATTTGAAG
GATGAAATAAGTGTTAAACCAAAAGATAAGAGTGCGGCCATAGTGTACTGTCGGACAAGG
GAACAGACGGAAGATATTGCCAGCATGCTAACAAAAAGAGGTCTAAACTGTTTGGCATAT
CATGGAGGCTTAAAGAGTAGCGAGCGTGTGTCTGTGCAGGACCGTTGGTCTAATGGTGAA
GTTCCCTGTGTGAGTGCGACTGTTTCATTCGGTATGGGTGTTGACAAAGCCAGCGTTAGG
GCTGTGGTCCACTGGGGTCTGCCGCAGAACGTGGCCGCTTACTACCAGGAGTCTGGGCGG
GCCGGTCGCGACGGTAAGCCCGCGTTCTGTCGTATATACTACTGCCGCAGTGAGCGTAAC
GCCGTTGATTTTTTGCTGAAATCGGAAATAGCCCGCTCTAAGACGCCCGAGCAAAAACAA
CGGTGCAAGAACGCGTATAAGAGTTTCGAAGTTATGGTCAAATATTGTGAAGAAGTCAGA
TGTCGCCACAAGATCTTCGCAGATTTCTTCGGCGAGGAGGTCCCTCAATGCATCACCCGC
TGCGACTCGTGCACAGACGAGCGTGCCGTCCGCCGCGCTCTAGACCAGCACACGCGGCGG
GCGATGAACGCCAGTCTGGGGAACACTGGCTTCGATAACAACGACTCCGCCAACTTGTAC
GGGGAGGGACGACACGGACAAAAGAAAGAGGCGGAGTCGTACTATGGCGACGGCAGCGGA
GACTCGGACAGTGATTCTAGTAGACGTCGCGTTGCTGAAGAAACGAAAAGTCTTATATTA
AAAGAATTCGCAGCTCGAAAAAAGAATACAGAGAAAAATAAAGCGAACAGTGACGCTGAA
TCCGCTAAGCACTCGAAATGTAAAGCAGCTGAGAGCACAGGGACGAAGGTGACCGGTCTC
ACAGTAGCGGGTCGTGAAAGCTATCTTTCCTTACTCACTGAAGCTTTGAGAGCAAATATC
GCTAACATGAAAGATATTGAAGAAACAGAACATACATTGTCGCGAGCGGACGTTGAACAG
TTCGCTATTGATTTAGAATATGACGCGTTCTCTAAAAGCACCGTCATAAGCCTGTATAGG
AGGGCCATGTCGAAATTGATAGCAGCTATCAAGGGATGTAAGGACACGCTGTACCCGGGT
CTCAAAACTTTTGAACCAAAGAAAACAGATTCGCTTATGGATTTTATAAAAGATTTCGAA
GCTAAACGAGGTACACAAAAGTATCTAGGTTTTATAACGGCCGCTCAGTTAGATAACAGT
ACTGCAAACACAGAACAAACTTTATCTAAATCCGATAAAGACAGTAAGAGGAAAGCTAAT
TTATTCAAAAAAGATCCTTTGACTCAAACCAAGCTGCAAAACTTCTTTTCAACAAAATCA
TCTCCTGAACCTCTAAGCTCAGACATGAGCGAGGACGAGGGTGGTCTAGTCATAGATGAG
AACGCTAAAGTAGATGACACAGAAACCACTCTACTCATAGAAGATAAAGATAAAACGACT
TCCGACTGTAAGGAAAGTTTAAAACCGTATATAGAGAGGAGCGATAGTGATTCCAGTAAT
AAAAGGCAACAGACTCTCGTGATTAACATAACGTTAGAGGGAATACCGAAACACGAGGAA
AATAAAGAAGGAAAAGTTAAACAAGAAAAAGATTGCAAACTAACGTCCCCCGAAAAGATG
AAGCCCACTGCAAAGAGAAAAATAAAGGCGCTGTTCGGAGAATCCTCTGAGAGCGAAACG
GAATTAAATGAAATCAAACGGTCTCGGACATCGCAGAAACTAAACGAACACAAGTCACCC
AATAAACAGTCGCATAGAAGAAGATCTGGAGAAATACAGTCTAAAACACGGAGCACTAAG
CATAGAGAGAAGAAGTCAAAGCGTAACGATGAAGACAGAGATAGAAAGATACCAGACGAA
AACAAGGCAGCGAGACCCGCTGCTGTACAAAACATATCCAACACATCCATCGTGAAAGAA
GAGAGTGAAAGGAGACAAGAGAATAAAGAAGTGTTGCATGAGAACATCGTCATGAATACT
GACAGCATTGACGATCCTGAAATAATCAGTGAAAATGATATGATCAACTCGGATGGTGAC
AAAATAGTAGACGAACAATCTCTAGAAAAAGCACACAAACTTAATCTTGAAGCTGAAAAG
GTATTGCAGGAGTTGAAGATATTTTCTGAAATCAAACCGGAAGTAAAACCTGAAGTAAAA
GAAAAAAATCAAATCGAAGTCAAAGTAAGTAAACCAAGGAGTCCGGTCACTATGTCCAAA
TCACCGACAAAACATGGCACAAAAGATAAATTAATACCCGACACTACGAAATCCAAAACC
GTTATATCTGCTGACAAACTTAAAGCTAAGCTACCGAAAGCGAGGGAAGAAATAAAAGAC
GATGTCAAGAAAAAAGAAAGACTCAAAGAAAAGAAGTCGGAGAAAATAGATGTCGCTGGC
CTTGTTGTTAAATTGTTGATGCCTTATTATAAAAAGAAAAAAATTAGCAACAGAGACTTG
TTTAAGATAACCGCCAGGCATATCGTGCATCAATTGCTTGCCATACAAATAACAGAAGAA
AAAGCGATAGAAATGCTTCTTAAGAAGACTTTCAGCAAGGAATTAAGAATTGAAAAGGAA
AGTGATCTAGAGACTAAATTAAAGTTCAACAATGTCACGTGA
Protein sequence:
MDNVTEKLLQCFGHRRFKSELQERAVRAIARGVHDVFVSMPTGSGKSLCFQLPAMLQENK
VAVVFSPLLALIKDQVDHLTKLKIAAESINSKMTQKDRERVLNDLRSMKPNTRFLYVTPE
QAATGTFKALMEHLVKYKKVSYVVVDEAHCVSEWGHDFRPDYLKLGNLREKFKSIPWVAL
TATASAEVTKDILENLKLLNPVAQYKTPSFRRNLYYDVVYQNCIQDEIGDLVEFLKKNLK
DEISVKPKDKSAAIVYCRTREQTEDIASMLTKRGLNCLAYHGGLKSSERVSVQDRWSNGE
VPCVSATVSFGMGVDKASVRAVVHWGLPQNVAAYYQESGRAGRDGKPAFCRIYYCRSERN
AVDFLLKSEIARSKTPEQKQRCKNAYKSFEVMVKYCEEVRCRHKIFADFFGEEVPQCITR
CDSCTDERAVRRALDQHTRRAMNASLGNTGFDNNDSANLYGEGRHGQKKEAESYYGDGSG
DSDSDSSRRRVAEETKSLILKEFAARKKNTEKNKANSDAESAKHSKCKAAESTGTKVTGL
TVAGRESYLSLLTEALRANIANMKDIEETEHTLSRADVEQFAIDLEYDAFSKSTVISLYR
RAMSKLIAAIKGCKDTLYPGLKTFEPKKTDSLMDFIKDFEAKRGTQKYLGFITAAQLDNS
TANTEQTLSKSDKDSKRKANLFKKDPLTQTKLQNFFSTKSSPEPLSSDMSEDEGGLVIDE
NAKVDDTETTLLIEDKDKTTSDCKESLKPYIERSDSDSSNKRQQTLVINITLEGIPKHEE
NKEGKVKQEKDCKLTSPEKMKPTAKRKIKALFGESSESETELNEIKRSRTSQKLNEHKSP
NKQSHRRRSGEIQSKTRSTKHREKKSKRNDEDRDRKIPDENKAARPAAVQNISNTSIVKE
ESERRQENKEVLHENIVMNTDSIDDPEIISENDMINSDGDKIVDEQSLEKAHKLNLEAEK
VLQELKIFSEIKPEVKPEVKEKNQIEVKVSKPRSPVTMSKSPTKHGTKDKLIPDTTKSKT
VISADKLKAKLPKAREEIKDDVKKKERLKEKKSEKIDVAGLVVKLLMPYYKKKKISNRDL
FKITARHIVHQLLAIQITEEKAIEMLLKKTFSKELRIEKESDLETKLKFNNVT