New model in OGS2.0 | DPOGS208032  |
---|---|
Genomic Position | scaffold1340:+ 12329-14790 |
See gene structure | |
CDS Length | 894 |
Paired RNAseq reads   | 898 |
Single RNAseq reads   | 2055 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001500 (3e-122) |
Best Drosophila hit   | mitochondrial ribosomal protein L2 (2e-86) |
Best Human hit | 39S ribosomal protein L2, mitochondrial precursor (4e-46) |
Best NR hit (blastp)   | mitochondrial ribosomal protein L2 [Aedes aegypti] (5e-105) |
Best NR hit (blastx)   | mitochondrial ribosomal protein L2 [Aedes aegypti] (2e-99) |
GeneOntology terms    | GO:0006412 translation GO:0003735 structural constituent of ribosome GO:0005762 mitochondrial large ribosomal subunit |
InterPro families    | IPR022669 Ribosomal protein L2, C-terminal IPR022666 Ribosomal Proteins L2, RNA binding domain IPR008991 Translation protein SH3-like IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold IPR014722 Translation protein SH3-like, subgroup IPR002171 Ribosomal protein L2 |
Orthology group | MCL14356 |
Nucleotide sequence:
ATGGCTTTGAACAGATTATTCGCAGGCTTAAGTCTAACTATATCACCACACGTAGTTGGT
CGAAGAGCCATACAAGTAGCAGCAGTTAATTATGCAAGTAAACCTAACATTGTCAAGCCG
AAACCAGGATTTGGTAAAAGTTACAGAAGAATCGTGCATTTCCCTGAAGAATATACCGTA
AAACCATTAGAAGTGACTAATCTGGCCGGAAGAGATCCTGTGTCAGGACGAGTAGTAGCA
AAAGGTATCGGCGGCGGGATAAAACACAAATACCATTGGATTAATTGGGTCAGGGATGGC
CCTACAGAAGGCCCGCCACAAGAAGAAAAAGTTATTGAGATAATTGAATGCGGTTGCAGA
ACGTCTCATGTAGCTTTAGTAGCTGTTGGGGATAAGCTTAAATATATTTTAGCTACAGAG
AATATGAAAGCGGGTGATATTATTAAGTCCTCACGTTACTTACCCAGAATACCTGTGAGA
GCTAATGAGGGTGATGCATATGTCCTTGGAGCTTTGCCGACCGGTACAATAGTACATTGT
ATAGAAAAAGAACCAGGTCAAGGTGGATTATACATACATGCAGCGGGAACGTTTGGTACA
ATACTCCGAAGACAGGATGACAGGATCATAGTTCAGATGCCATCAAAGAGATTGTTCAGT
TTTAATGAACATTGCATGGCTGTTGTCGGTCGTCTGTCCAATGTTGACCATGGTAATACC
CCGATAGGCTCCCCTCAGAGGAACAGGTGGCTCGGTAACAGACCACGATCTGGACTCTGG
AAGAGGAAGGATGGAAGACACGGAAGGAAAATCAGACCACCCAAACCCGTCAAGGAGATA
TTCCATCCCTCAAACTTCCCTCTACCCACTGTTAATATGACCATGCATCATTAG
Protein sequence:
MALNRLFAGLSLTISPHVVGRRAIQVAAVNYASKPNIVKPKPGFGKSYRRIVHFPEEYTV
KPLEVTNLAGRDPVSGRVVAKGIGGGIKHKYHWINWVRDGPTEGPPQEEKVIEIIECGCR
TSHVALVAVGDKLKYILATENMKAGDIIKSSRYLPRIPVRANEGDAYVLGALPTGTIVHC
IEKEPGQGGLYIHAAGTFGTILRRQDDRIIVQMPSKRLFSFNEHCMAVVGRLSNVDHGNT
PIGSPQRNRWLGNRPRSGLWKRKDGRHGRKIRPPKPVKEIFHPSNFPLPTVNMTMHH