| New model in OGS2.0 | DPOGS205605 |
|---|---|
| Genomic Position | scaffold3086:+ 3570-12894 |
| See gene structure | |
| CDS Length | 1704 |
| Paired RNAseq reads | 5791 |
| Single RNAseq reads | 14101 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007210 (2e-32) |
| Best Drosophila hit | CG4538, isoform A (3e-149) |
| Best Human hit | ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial precursor (3e-151) |
| Best NR hit (blastp) | PREDICTED: similar to ATP-dependent clp protease atp-binding subunit clpx [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to ATP-dependent clp protease atp-binding subunit clpx [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0017111 nucleoside-triphosphatase activity GO:0005524 ATP binding GO:0000166 nucleotide binding GO:0051082 unfolded protein binding GO:0006457 protein folding |
| InterPro families | IPR003593 ATPase, AAA+ type, core IPR013093 ATPase, AAA-2 IPR019489 Clp ATPase, C-terminal IPR004487 Clp protease, ATP-binding subunit ClpX |
| Orthology group | MCL12375 |
Nucleotide sequence:
ATGATAATTAAAGTGACGGAGTGGTTTGACTTTGAGGTAAATTTGGCTGAACGCTACAGT
GACATAAGCAAGTACGTAGCGTCAGGTGTTCAGACGTGTCGCGCCATCCGTCGCTCCTGT
GCCCGCAGCATCAGCACCGGCGTCTCCCTCAGGAAGGGCACCGGGGAACTGCCGCCATCA
CACAACAAGGATGGGAATACATCCGGAACATCAGGTAAGAAAGGCGGCAGCGGAGTCCTA
ACATGTCCTAAGTGCGGGGACCCTTGTACCCACGTTGAGACGTTCGTCAGCTCGACACGT
TTCGTGAAGTGCGACAAGTGCCACCACTTTTTCGTGGTCCTCAGCGAGGTGGACACCAAG
AAGAGCATCAAGGACAACACTGAGAACAAGTCCGGCTTCTACAGGAAACCTCCTCCTCCA
CCAAAGAAGATCTTCGAATATCTGAACAAGCACGTGGTGGGTCAGGAATACGCCAAGAAG
GTGTTGTCAGTAGCCGTCTACAACCACTACAAGCGTATATACAACAACGTGACGAGCGGC
GCGCCCGCCGACGGACAACATCCGCTACATCACACGCACAGAGATCTGCTCCACGTGAAC
CAGGGCCAGAGCCCCGGCGCGGGGGGAGGGGCGGAGGTGCTGGAGAGGAACAACCACGAG
CTCAGGCTCGACAAGAGCAATGTGCTGCTGCTGGGACCCACCGGCAGCGGTAAGACCCTC
CTCGCTCAAACCATCGCCCAGTGCCTGGACGTGCCGTTCGCTATCTGTGACTGCACCACC
CTCACCCAGGCCGGGTACGTGGGTGAGGACATCGAGAGCGTCATCGCTAAACTGCTACAG
GACGCCAACTTCAATGTTGAACGAGCACAGACCGGTATAGTGTTTTTGGACGAAGTCGAC
AAAATAGGAGCCGTGCCCGGGATACACCAGCTGAGGGATGTTGGAGGCGAGGGAGTTCAG
CAGGGTATGCTGAAGATGTTGGAGGGCGCGCTGGTGTCCGTCCCCGAGAGGAACTCGCGC
AAGCTGAGAGGAGACGCCGTGCAGGTCGACACCACCAACATACTGTTCGTGGCCAGCGGC
GCTTATAACGGACTGGACAGACTGATCCAGCGTCGCAACAACGAGAAGTACCTCGGCTTC
GGTGCCTGGGACCCTCGCTCGGGGCGCCGCGCAGCCCTGGCCGCCGCCGCCGCCGACGCC
TCGCCCCTGGACAGCGCCACGGACGAGGCGGGCGAGAGGGACCACTGGCTGCGAGCCGTG
CAGGCCCGGGACCTTATCGACTTCGGCATGATACCGGAGTTCGTCGGCCGCTTCCCGGTG
CTGGTGCCCTTCCACAGTCTGAACCAAGATCTGCTGGTTAGGATACTCACGGAACCCAAG
AACGCCATTGTGGCTCAGTACAAGTTGTTGTTCGCGATGGACAAGTGCGAGCTGTCGTTC
AGCGACGAAGCCTTACGAGCGGTGGCCGCACTCGCCATGGAGAGGAAGACGGGCGCCAGG
GGATTGCGGGCTATCATGGAGAATCTGTTACTGGAGGTGATGTTCGAGATCCCCGGCTCA
GACATAACCTGCGTCCACATACACGAGGGCTGCGTGCAACGAGCGGAGCCGCCCACCGTG
AGGCGGAGGGAGAGGGAGAGGCAACCCTGGAGCTCGGAGATGAAATCGGATGCTGAGTCT
GAAACACACTCGTGTGCTCTGTGA
Protein sequence:
MIIKVTEWFDFEVNLAERYSDISKYVASGVQTCRAIRRSCARSISTGVSLRKGTGELPPS
HNKDGNTSGTSGKKGGSGVLTCPKCGDPCTHVETFVSSTRFVKCDKCHHFFVVLSEVDTK
KSIKDNTENKSGFYRKPPPPPKKIFEYLNKHVVGQEYAKKVLSVAVYNHYKRIYNNVTSG
APADGQHPLHHTHRDLLHVNQGQSPGAGGGAEVLERNNHELRLDKSNVLLLGPTGSGKTL
LAQTIAQCLDVPFAICDCTTLTQAGYVGEDIESVIAKLLQDANFNVERAQTGIVFLDEVD
KIGAVPGIHQLRDVGGEGVQQGMLKMLEGALVSVPERNSRKLRGDAVQVDTTNILFVASG
AYNGLDRLIQRRNNEKYLGFGAWDPRSGRRAALAAAAADASPLDSATDEAGERDHWLRAV
QARDLIDFGMIPEFVGRFPVLVPFHSLNQDLLVRILTEPKNAIVAQYKLLFAMDKCELSF
SDEALRAVAALAMERKTGARGLRAIMENLLLEVMFEIPGSDITCVHIHEGCVQRAEPPTV
RRRERERQPWSSEMKSDAESETHSCAL