New model in OGS2.0 | DPOGS205330  |
---|---|
Genomic Position | scaffold1762:+ 653-10985 |
See gene structure | |
CDS Length | 4170 |
Paired RNAseq reads   | 8766 |
Single RNAseq reads   | 21629 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007388 (0.0) |
Best Drosophila hit   | CG17839, isoform B (7e-165) |
Best Human hit | PREDICTED: LOW QUALITY PROTEIN: hemicentin-2 (3e-08) |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (0.0) |
GeneOntology terms   | GO:0016021 integral to membrane |
InterPro families    | IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR003961 Fibronectin, type III IPR002602 Domain of unknown function DB IPR013098 Immunoglobulin I-set IPR013106 Immunoglobulin V-set IPR007110 Immunoglobulin-like IPR008957 Fibronectin type III domain IPR013783 Immunoglobulin-like fold |
Orthology group | MCL18334 |
Nucleotide sequence:
ATGAGGGCGCCGGCTGGTGCTGTCACTGTGAAGAGTGGCGAGGATGCTCTGCTGACTTGC
GTGGTGCTAGGAGCTAAGGAAAGACCGGTGATATGGAAACGGGCGAGGGATCATCAAGTA
TTGACAGCTGGCAACCTGAGAGTGACTCGAGACGATAGGGTGCAAGTGTTGCACGATGAT
TCTGAAGAGCCCCTCCAAGGTCCAGGCATCACAAAGGGCGGGGACGTGTGGGCGCTCGTC
ATAAAAACCGTCAAAGCCTCAGATGCCGGAATGTACGTGTGTGAACTAAACACAGAACCG
CCTGTCAGAAGTTTCCACAAATTGACTGTAATTTCGAGAGGGCTAACTCCACCAGAGAAT
CAAAATACCACTGATAGCTACTCCGCTAACGTACCTACACTATCATCAATAGCGTTCTCG
CATAACTATACTGATTGTTGTTTATCTGCGAACGTGACAAAAAGCTGTTTGGGCTACTGC
AGTATACAGTCTATTCTGGATGGGCCTGGACAAGATCCAGAAGCGTGTCAAACTGATTTC
CCGTCAATTGTAAAATGCATGGCGGATGGCCGTAATCATGTACCATGCTGTGTCCAAGAG
CATATTCCTGATATATGCCAAGACGTGTGCAGAGGAGAGTACTCTCCGGTAACAGATAAC
ATTAAAACTCACTACTCCTGTGCTGCTTCGATGGACAAAACTTTAGCTTGCATCGTTGAG
GGCATAGAACTCCTGCCAAGTCAACCCGAAGACGTAGAAGTGGAGCCTCTAAATGAAAAA
CAACTAAATGTCTCATGGAACCCACCAACAGAAAACACAGAATCTGTCACTGAATATATC
GTAAATGTGACAACCTTGCGATCCTTTGATGCCCATTTAATAGATCCCTCCGAGAGTTCT
CTAAAGAATATAAGCGACAAAACTAATACAAAAAATTTCAAAGTACCATCAAACAAAACT
TTTCTAGTTATAAATGACCTACTACCCTTTACGATGTATGAGATTACAGTGACGTCATAT
AATATCCACGGTTCGAGTTTACCTAGCTATGGGATTAGATCGTTAACCCTCACACCCGGT
AAGATGAGGAACACAGAAGTAGCGGCAGCCCCAAAACTGCCCGATGTTAAAGGTTGTTGC
GTTAAAGCCGGTATCAATCATTATGGATGCGTTGACAAACTTTGTGATCCAACCAAAACT
TATGAGATTGCGGTCACAGATCTCATGATCTGCGCTCCTTGGGCCGGCATAACTTTCGGA
TGTCTCGCCAACGGCATGGACCATTCGCCTTGTTGTCGAGCTAGAGGACTACCAGACACT
TGCCTTCCATTGTGCAGTGGAAATATCACAACGTTGGATTTCAATCATTTTAAGTGTCTT
CGTTACATGACTGCGTACACAAATTGTCTTTTACAAGGCTACGGAGTACTACCAGGTCCG
CCATCCCGCCTTCACCTGACTAACATAGACACAGACTACGCTGTAGTGCATTGGGCACCA
CCTGCAGTACTAGCCGACACCGTCCAGTATTACCACCTGCATTTCAAATCTCTACAGTCT
GAAGAAGATTATAGGACATTGGATAAAGTACAGTCTCCGTACATTCTTGAAAATTTAGAA
TCAAACACTGATTACGAGATCTATGTAGAAGCAGTGAATGAGCACGGGGTTGGAGAATCA
TCACCTCGACTTATATTCAGGACTCAGAGTCAGGTGATAGAGGAAGAGGAAGAGAACGCT
CTTGCTTACAACGTGACTGCATGTTGTTCTAACGTGGGCGTCTCATCCGTGTGCATGCCG
CTGTGTGCGTACGACGCACGCATGTCCGATCTGCGTTCTCTGGCGCCACTCTGTGATCGG
GACTTCCCCAAAATTGTTCGATGTGGGGCTGGTGGTCGAAATCACGAGAAGTGCTGTGCT
AGACGTGGGGTGCCGCGTGCCTGCAGCTCTGTGTGCACAGGAGCAGCACAAGTATCGTTA
TTTTACTCCTGTGTCGCATACATCGGAAACGTTGTGCAGTGCTTTGAGGAAGGTACGGGC
ACATTACCTGGTCCACCACGTGAAGTACACGCAGTGATATCAAGAGATAAACTATTTTTG
GACTGGTCACCACCAGCTGATGGCGCTAACGCTACTTCATACGTCGTGCATTGGCAGAAA
GTCGGGAACAACACCCAGCCTTACTATTACAACACTTTACAGTTGGACAACAAAATAAAT
GCAACTGAGACTATGGCACGGATGGAAAATTTGGAGGTAAACAGCTCATACCACATGTTT
GTGGTGGCGGTCAACGAACATGGAACCTCTCTACCATCCAGCATGCTGCTCATCAACATA
ACTAATGACGCTGAGAACAAAGAGGTATCCGGTATTCCATCTCCTCCTCACTCACTCTCT
GTTGCGTCTCACTCAGCCACATGGCTGGCTCTGAGCTGGCAACCTCCACAATTCTCCCTA
CCCGATGAAAAAATATCTTATACATTGTACGTTAAAACGCCGTCAAGCCAATCCAACACG
ACTAAGATCACTACATCAGTGACTGGCCATACGCTGGAGAAGTTGTCTCCAAACACCCAG
TATGTAGCCTGGGTAGTTGCGACTGCCGGAGCTGGTAGTTCACCGCCTTCCGAAACTTTA
CTAGCATGGACTGATCCAGCTTACCCCGCTTTCGTTGAGCCCCCGACAATCAACCCGGTT
AACCTTGTAGTCGAAGGATCTAGCATGACTATTCTTTGTATTGCCATGGGAACCCCAACC
CCCACCATATCGTTATACATTTCTGGTCACCTCGTCCGTCAAGAAGTAACCCGTCACATG
GTAACAGTCGTCCACAACGTCACGAGAGATATGGAACTGATATCATGTTACGCGGATAAC
GGATACGGCACCCCTATGCAGGCGTCTCGTAAAATCAATATATCACACATACCTACCATC
CAAGCGTCAGGTATTACCATGGCTGCGGCGGGTGACTCTGTTATACTGGAATGTCGTGTG
GAAGCGCTCCCCAAACCCACAATCGCTTTCTGGAGGGACCCTAATGGAAGAACACCAGAA
AAAACAAAATACACGATGCGATTAATAATAAAGAAGATAACGGAAACTGATGAAGGAGAT
TACTTTTGTCACGCGGAAAATGCATTTGGCAAAACATTACGCCCTGTGTCGGTACGACTG
CGAGCAACCGGCCCACATCACAATGTCACTGAATGCTGCACACAGATGAACGTGTCGTCG
TCATGTATCGACGCGTGCAGCTTTCACTTGGACATGGACAACATCATGGACCGTCCTGAG
TGCATGAACGATTTTGATAAACTCATGAAATGTGCTGCTGATGGATCAGATCACCGTAGT
TGTTGTGCTTCCTGGGGCGTTCCTCGGAACTGCCTGGAACTTTGTCGCGGCGGTTCCGTT
TCCAAGACTTGCGCTCTCCAACATGCAAGACGAGCATTGGCCTGCTTTAGAGACTCTGGT
GCTAAACTACCAGGTCCACCAAGAAACTTAAAAGCACATGCTGCCCCTACACCAAATACT
GTGTTGCTAAGCTGGGAGCCGCCCCTAAAGAATCCGCAAACCGTGTATCTTTATCGTGTT
TTCTGGCGAGCGTATGGTGCCAAAGTCCCTGAGAAGTTGGACACAAGTGAAACCAGCGTG
GTACTGACCGGTCTACAGGATGATGTGCGTTACGAATGCGTGGTGAAAGCTGCCAATGAT
GCGGGTACATCATCTCTCAGCCAGTCAATCATGTTTACGACTGCTGGTCAGGAGACGGGG
GCATCAGCTTCTAAAGTGTCGACTTCTGGAACAGCCTCCGCAGTGGGAGTAGCGGTGGCT
TGTATTCTAGTAGTCGCCATATTATTAGCTGCTGGTCTTTATTACAGACATAGAAAGAAT
CTTAGACTAAAGGCCCAAGGAGGAGTTGCCTTCGAAAACCCAAGCTACCTCAGAGAACCA
AACCCTGATAGCGTTGTCAATGGTAACGTACCTAACGGGATTACCAACGACAATATGAAC
GTCATTGGCAATGGTATATCTACGAGCACAGCATGGAGACAAGAGACCCAGACGCCTGGC
AGCACCATCCCACAGCGGGAGGTGGATCCTTCCTTATATGAAGAACTAAAACTCGGCCAC
GACGGGGCGGGCTTCAAGAGACTGAAGTAG
Protein sequence:
MRAPAGAVTVKSGEDALLTCVVLGAKERPVIWKRARDHQVLTAGNLRVTRDDRVQVLHDD
SEEPLQGPGITKGGDVWALVIKTVKASDAGMYVCELNTEPPVRSFHKLTVISRGLTPPEN
QNTTDSYSANVPTLSSIAFSHNYTDCCLSANVTKSCLGYCSIQSILDGPGQDPEACQTDF
PSIVKCMADGRNHVPCCVQEHIPDICQDVCRGEYSPVTDNIKTHYSCAASMDKTLACIVE
GIELLPSQPEDVEVEPLNEKQLNVSWNPPTENTESVTEYIVNVTTLRSFDAHLIDPSESS
LKNISDKTNTKNFKVPSNKTFLVINDLLPFTMYEITVTSYNIHGSSLPSYGIRSLTLTPG
KMRNTEVAAAPKLPDVKGCCVKAGINHYGCVDKLCDPTKTYEIAVTDLMICAPWAGITFG
CLANGMDHSPCCRARGLPDTCLPLCSGNITTLDFNHFKCLRYMTAYTNCLLQGYGVLPGP
PSRLHLTNIDTDYAVVHWAPPAVLADTVQYYHLHFKSLQSEEDYRTLDKVQSPYILENLE
SNTDYEIYVEAVNEHGVGESSPRLIFRTQSQVIEEEEENALAYNVTACCSNVGVSSVCMP
LCAYDARMSDLRSLAPLCDRDFPKIVRCGAGGRNHEKCCARRGVPRACSSVCTGAAQVSL
FYSCVAYIGNVVQCFEEGTGTLPGPPREVHAVISRDKLFLDWSPPADGANATSYVVHWQK
VGNNTQPYYYNTLQLDNKINATETMARMENLEVNSSYHMFVVAVNEHGTSLPSSMLLINI
TNDAENKEVSGIPSPPHSLSVASHSATWLALSWQPPQFSLPDEKISYTLYVKTPSSQSNT
TKITTSVTGHTLEKLSPNTQYVAWVVATAGAGSSPPSETLLAWTDPAYPAFVEPPTINPV
NLVVEGSSMTILCIAMGTPTPTISLYISGHLVRQEVTRHMVTVVHNVTRDMELISCYADN
GYGTPMQASRKINISHIPTIQASGITMAAAGDSVILECRVEALPKPTIAFWRDPNGRTPE
KTKYTMRLIIKKITETDEGDYFCHAENAFGKTLRPVSVRLRATGPHHNVTECCTQMNVSS
SCIDACSFHLDMDNIMDRPECMNDFDKLMKCAADGSDHRSCCASWGVPRNCLELCRGGSV
SKTCALQHARRALACFRDSGAKLPGPPRNLKAHAAPTPNTVLLSWEPPLKNPQTVYLYRV
FWRAYGAKVPEKLDTSETSVVLTGLQDDVRYECVVKAANDAGTSSLSQSIMFTTAGQETG
ASASKVSTSGTASAVGVAVACILVVAILLAAGLYYRHRKNLRLKAQGGVAFENPSYLREP
NPDSVVNGNVPNGITNDNMNVIGNGISTSTAWRQETQTPGSTIPQREVDPSLYEELKLGH
DGAGFKRLK