| Genomic Position | scaffold1206:- 57743-58681 |
|---|---|
| See gene structure | |
| CDS Length | 939 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 0 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011163 (1e-08) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (3e-109) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (2e-106) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGGAAAAATATGTTCTCTTCGTTTCTCGCGAGATCATCGCATATGTTGATTATAAAAAA
GCTTTTGATACCGTGTCACGTTCAAGTATATGGACCGCTCTGCAAGCCGAGAAAGTTGAA
CAAGAGTACATAGATATTATTAGAAACATTTACAAAGGTAGTACAGCAAAAATAAAACTA
GAATCCACTGGTCCTACGATCTCTATGGGAAGAGGCGTGAAACGAGGCGACCCGCTGTCT
CCAAAATTATTTATATCCATCCTAGAGTCAATAATAAAAATCCTCAACTGGGAAAAGACA
GGATTAAACATCAATGGCAAGTATTTATCCCACCTACGCTTCGCAGATGACTTAATTCTA
CTGTCAGAATCTAGCACACAATTGCAAAACATGATTGATTCACTAAACACAGCTAGTAAA
CAGGTAGGACTAGAAATGAATTTATCGAAAACAATGGTCATGACAAATAGTATACAGGGA
AGAATATCTGTGGAAAATGAAAATCTGAAATATACAGAGACATACATCTATCTAGGAAGA
CAAATTGGCTTCAACAGAAAGCAAAACGAACTAGAAGTAGAACGAAGAGTACAAAATACT
TGGAACAAGTACTGGTCCTTAAAAGAGATATTCAAAAGCAACATGCCAATAAATATCAAA
ACAAAAGTCATGACGTCATGCCTCCTACCGTGCCTAACCTACGCATGTCAACCTTGGAAA
TATACATCCAAATTAAAAACAAAAATACCCACCAGCCAACGCGGAATAGAACGAAGTATG
CTCAATATTAAAAAGATGCAAAAAATTCGTCACACAAAAACTAGAGAAACCACTAAAGCG
ACGGATGCTCTAACCTACGCTAAGAAACTAAAATGGAAGTGGGCTGGGCACGTAGCGAGG
CTAAAGGACGAGAGATGGACTAGCAGGGTTACAAAGTGA
Protein sequence:
MEKYVLFVSREIIAYVDYKKAFDTVSRSSIWTALQAEKVEQEYIDIIRNIYKGSTAKIKL
ESTGPTISMGRGVKRGDPLSPKLFISILESIIKILNWEKTGLNINGKYLSHLRFADDLIL
LSESSTQLQNMIDSLNTASKQVGLEMNLSKTMVMTNSIQGRISVENENLKYTETYIYLGR
QIGFNRKQNELEVERRVQNTWNKYWSLKEIFKSNMPINIKTKVMTSCLLPCLTYACQPWK
YTSKLKTKIPTSQRGIERSMLNIKKMQKIRHTKTRETTKATDALTYAKKLKWKWAGHVAR
LKDERWTSRVTK