| New model in OGS2.0 | DPOGS204649 |
|---|---|
| Genomic Position | scaffold9190:- 1554-10811 |
| See gene structure | |
| CDS Length | 2139 |
| Paired RNAseq reads | 7183 |
| Single RNAseq reads | 17326 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001849 (0.0) |
| Best Drosophila hit | Threonyl-tRNA synthetase, isoform C (0.0) |
| Best Human hit | threonyl-tRNA synthetase, cytoplasmic (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to RH56418p [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to RH56418p [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0006435 threonyl-tRNA aminoacylation GO:0004829 threonine-tRNA ligase activity GO:0005737 cytoplasm GO:0005524 ATP binding GO:0007040 lysosome organization |
| InterPro families | IPR002320 Threonyl-tRNA synthetase, class IIa IPR006195 Aminoacyl-tRNA synthetase, class II IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain IPR004154 Anticodon-binding IPR012676 TGS-like IPR012675 Beta-grasp fold, ferredoxin-type IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain IPR004095 TGS IPR012947 Threonyl/alanyl tRNA synthetase, SAD |
| Orthology group | MCL10933 |
Nucleotide sequence:
ATGGGAGACGCGGCAGTGGAAGAAGTTAAGAATCTAAATATTAACGAAAAGTCAAAATCG
AAAGCAATGAAAGAAAAAAAGAAGACAGAGTCATCCTCTGGTGTTTCTGAACTGCAACCC
TGGCCGGAGTTCATTCAGAAGAGGATAGACCTATGGGATAAGTACAAAGCACAGTATGCA
GAAGCCCTAGCCTCTAAACCTGATGTGAGTGTTGTTGTGACACTCCCTGATGGCAAAACC
GTTGAGGCCAAAGCCTGGCATACAACCCCATATGACGTGGCCAAAGGCATCAGCCAGGGT
CTAGCAGATGCTACTATCATAGCGAGGGTGAACGGTGTGCTTTGGGACCTTGATCGGCCG
TTGGAAGGAGATTGCAAGTTGGAGTTACTGAGATGGGACAACACGGACGCACAGGCAGTG
TTCTGGCATTCCTCTGCCCACATGCTCGGAGAGGCCATGGAGAGGGTTTATGGTGGGTGT
CTCTGCTACGGTCCCCCCATCGAGGAGGGTTTCTACTATGACATGTTCTATCCAGAGAAG
GGGATATCGTCAACGGATTTCGGCGTCATAGACGCTCTTGTTAAGAAGATAGCTAAGGAG
AAGCAGCCGTTTGAGCGTCTGGAGCTCACCAAGGAACAACTCCTGGAGATGTTCGACTAC
AACCCGTTCAAAGTGAGGATCCTCAAGGAGAAGGTGGACACGCCCACCACCACCGTGTAC
AGGTGCGGGCCCCTCATCGATCTCTGCCGGGGACCCCACGTGAGGCACACCGGCAAGGTC
AAAGCGTTCAAGGTCACTAAGAACTCGTCCACGTACTGGGAGGGGAAGGCCGACGCTGAG
ACCCTTCAAAGGGTGTACGGCGTGTCGTTCCCGGAACCCAAACAGCTCAAGGAGTGGGAG
CTGATGCAGGAGGAGGCGGCCAAGAGGGATCACAGGAAGATAGGCAGGGAACAAGAGTTA
TATTTCTTCCACGAGCTGTCTCCTGGGTCGTGTTTCTTCCAGCCGAGGGGAGCTCACATA
TACAACACGTTGGTCAACTTCATCAGGGAACAGTACAGGAAACGCGGCTTCCAGGAGGTG
GTGACTCCTAACATGTACAACGCCAAGCTGTGGCAGACGTCGGGTCACTGGGCGCACTAC
GCCGAAAACATGTTCTCCTTCGACGTCGAGAAAGAGACCTTCGCTCTCAAACCCATGAAC
TGTCCCGGACACTGTTTGATGTTCGACAACCGTGTCCGGTCGTGGCGCGAGCTGCCCCTG
CGGCTGGCGGACTTCGGGGTGCTGCACAGGAACGAGCTGAGCGGAGCGCTCACTGGACTA
ACCCGCGTCAGGCGCTTCCAACAGGACGACGCGCACATCTTCTGTACGCCGCAGAACATT
GAGCAGGAGATGATCGGTTGCTTAGAATTCCTCGAGCAGGTGTACTCGACCTTCGGCTTC
ACGTTTCAACTGAAGCTCTCCACGCGCCCTGAGAAATACCTCGGAGACCTGGCGACCTGG
AATCAGGCTGAGAAGGCCCTGGAAGACTCCCTCAACAGATTCGGCAAGGTCTGGCAGCTC
AACCCGGGCGACGGCGCATTCTACGGGCCCAAAATAGACATTACTATACAGGATGCTCTG
AGACGATCACATCAATGTGCGACCATACAACTGGATTTCCAACTGCCGGAGAGGTTCAAC
CTGAGTTACATCAGTGAGACGGGAGAGAAGAAGCGGCCAGTGATAATCCACCGGGCGGTG
TTGGGTTCCGTGGAGCGTATGATAGCTATCCTGAGCGAGTCGTACGCCGGCAAGTGGCCG
TTCTGGCTGAGTCCGAGGCAAACTTGTGTGGTGCCCGTCGGTCCCAGCTTCGACGATTAC
GCCACATACGTGAATGAGAAGTTGTTTGCCGCTGGGTTCATGTCTGAAGTTGACACGGAT
GCCGGAGACACACTCAACAAGAAAGTCCGGAACGCACAGCTGGCACAGTTCAACTATATA
CTCGTTGTGGGCGAGCGAGAGAAGTCCTCCAACACAGTGAATGTCCGTACAAGAGATAAC
AAAGTCCACGGAGAAATGTCCATCGAGGGTCTGATAGAGCACCTCAACAAGCTGGTCGCT
GAGAAAACGCTCTCCGAGGACAGTGAGCTGCTCAAATAG
Protein sequence:
MGDAAVEEVKNLNINEKSKSKAMKEKKKTESSSGVSELQPWPEFIQKRIDLWDKYKAQYA
EALASKPDVSVVVTLPDGKTVEAKAWHTTPYDVAKGISQGLADATIIARVNGVLWDLDRP
LEGDCKLELLRWDNTDAQAVFWHSSAHMLGEAMERVYGGCLCYGPPIEEGFYYDMFYPEK
GISSTDFGVIDALVKKIAKEKQPFERLELTKEQLLEMFDYNPFKVRILKEKVDTPTTTVY
RCGPLIDLCRGPHVRHTGKVKAFKVTKNSSTYWEGKADAETLQRVYGVSFPEPKQLKEWE
LMQEEAAKRDHRKIGREQELYFFHELSPGSCFFQPRGAHIYNTLVNFIREQYRKRGFQEV
VTPNMYNAKLWQTSGHWAHYAENMFSFDVEKETFALKPMNCPGHCLMFDNRVRSWRELPL
RLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTPQNIEQEMIGCLEFLEQVYSTFGF
TFQLKLSTRPEKYLGDLATWNQAEKALEDSLNRFGKVWQLNPGDGAFYGPKIDITIQDAL
RRSHQCATIQLDFQLPERFNLSYISETGEKKRPVIIHRAVLGSVERMIAILSESYAGKWP
FWLSPRQTCVVPVGPSFDDYATYVNEKLFAAGFMSEVDTDAGDTLNKKVRNAQLAQFNYI
LVVGEREKSSNTVNVRTRDNKVHGEMSIEGLIEHLNKLVAEKTLSEDSELLK