| New model in OGS2.0 | DPOGS204574 |
|---|---|
| Genomic Position | scaffold266:- 26001-33956 |
| See gene structure | |
| CDS Length | 2169 |
| Paired RNAseq reads | 440 |
| Single RNAseq reads | 1126 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001979 (0.0) |
| Best Drosophila hit | CG6867 (6e-117) |
| Best Human hit | olfactomedin-like protein 2B precursor (6e-27) |
| Best NR hit (blastp) | colmedin [Culex quinquefasciatus] (0.0) |
| Best NR hit (blastx) | AGAP005849-PA [Anopheles gambiae str. PEST] (2e-177) |
| GeneOntology terms | GO:0005576 extracellular region GO:0031012 extracellular matrix GO:0050840 extracellular matrix binding GO:0030198 extracellular matrix organization |
| InterPro families | IPR007110 Immunoglobulin-like IPR003112 Olfactomedin-like IPR013783 Immunoglobulin-like fold IPR008160 Collagen triple helix repeat IPR013098 Immunoglobulin I-set IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 |
| Orthology group | MCL12323 |
Nucleotide sequence:
ATGAGACCAGAACTAGAAGAGAAAGACTCCATAGAAATGAAAAGAACCGGTGCCAAGGGA
CCTGCCCCGGGAGACGACACTTGGGTTTGGCTGACGAGCTACTCCAGGGTCCCATACAAA
GTAGTTCAGGGGTTTTGCAAGGCTACTCAGGATTACTGTCCTCCTGGCGTCCAAGGACCA
AAAGGTCCCATGGGTCACCCAGGTCCAAAAGGAGACAGGGGGTCACCAGGGGAGGCTGGC
ATACCTGGTAGCCCAGGTTCAGTAGGACCTTTCGGACCCCCTGGACCAAAAGGCGAACGT
GGATTTCCGGGGAATCCTGGCTTAGATGGTAGAGATGGAGTGCCAGGAGAACCAGGACTT
GATGGCTTGCCGGGGCGGAATGGGGCAGACGGAGCCCCGGGTAGGTACGGACAAGACGGG
ATACCAGGCAGGGATGGAATCCCAGGAAAAAATGGAAAGGATGGAAAAGATGGAAAAGTC
GGAGCTCAGGGCCCACCTGGTATTCGAGGCCCTAAAGGCGAACGAGGTCCAATCGGCCCC
AAAGGCCCGAAGGGAAATGACGGACTTAACGGAATACCCGGCAAGCCAGGACTATCCATC
TATAACTACACCAAAGAAAACCAGATGTTCATTCCCCCTTCCTTTGCATTGGATAATCCG
AGACTTATAGTAAGAGAGGGGGATACTATGAGATTGGACTGCAATCCCAAAGGCTTCCCT
GAACCCATCATTGAATGGAGGAGAGCTGACGGCACACCCATTATTCAGGGTTCATGGCGT
GACGCCTCCGTCAGTGGTCACGTGCTTAACATACCAAACGTATCTCGTTGGCACACCGGC
AAGTATGTGTGTCTCGCTAACAACGGCATGCAGCCTCCCGCCAACCAGACCACGGATGTT
GAAGTTAATTTCAGCCCATACATCAGGGTGCCAAACAACATAGTCTACGTATTCAACAAA
ACTGCCCAAATCGAGTGCGAGATTCAAGCCTGGCCGGAGCCAGTGCTGGCTTGGGAGTAC
GACGATGGAACAACAGTCGAGGGATCACACTACAAGATTGAGGTGGCGCCAACACCGGAT
CCCTGGAGGTGGATCATGAAGCTGGAGATACCTCACATCAATGAGCACGACATGCGCCAG
TACATCTGCGTGGCCAAAAATGAACTCAATAACACAACCGTCAGAGGCTATATTAGACTG
TCCCATCCTGGTCCGAAACAACAATCTCAGATACAACAACAACCACGCGAGTTCGGCTCC
CCGCCGCCCACGTTGACCTCGTACGAAGAACTGTGCTCCGCCCAACGCTGCCCATCCTGC
CCACGATGTGATCGAGCGCTCATGATCACGCCCATGAACGCCAGCTTAGGCAACAAGCCT
CACCGGAATACCAATTGTCAGCTGTACGCGATCGGCAAACCAGTGTACCACAAGTACAAG
GAGGAGTTGTTTGGTGCCTGGCTAAGAGATTCGAATTCCTCTGAAGCTCAGCGAGAGAAG
CTGTGGACTACCCAGGAGAACGACGTGGAGAGATTGCACGAATTCCGGAGTAAGGCAAGC
TTCAAGTCGGATAGAGTAGACGAGTTCCACAAACTCCAGAAACCTTTCTTTGGTAATGGT
CACATAGTGTACAGCGGCTCTTTCTTCTATCAAGCCAACGAGTCCGGTACACCCGGCGAC
ATTGTGCGCTACGACCTGACACAAAGCCGTATCAAATCAGCACATCTACCGCACGCGCAG
GGCAGACTGTACACGGCACAACACAACCAAGTCGACTTCAGCGCCGACGACAACGGCCTC
TGGGCGATTTACTCCATAGAAGGTTCGAATAACACAGCAGTTGCTAAGCTGAGCTTTGAT
CCCAACAAGGATGATCTTAATATAGACTATATCTGGAACATCTCCTTAAATCATAAACAA
GTAGGTGAAATGTTCATAGTTTGCGGCGTCCTCTATGCGTTGGATTCCGCAACAGAACGC
GACAGCAAAGTATCGATCGCCATTGACTTGTACCTTAGCAAGTCGATCGATGTCACACTG
CAGTTCACGAATCCATTCAGAAAAACAACACAATTAGGCTACGATCACACGCATAAGGAA
CTATATTCCTGGGATAGGGGTAATCAGCTGACATATCCAGTCCGGTACAACGAACTTCCG
GGCCCCTAA
Protein sequence:
MRPELEEKDSIEMKRTGAKGPAPGDDTWVWLTSYSRVPYKVVQGFCKATQDYCPPGVQGP
KGPMGHPGPKGDRGSPGEAGIPGSPGSVGPFGPPGPKGERGFPGNPGLDGRDGVPGEPGL
DGLPGRNGADGAPGRYGQDGIPGRDGIPGKNGKDGKDGKVGAQGPPGIRGPKGERGPIGP
KGPKGNDGLNGIPGKPGLSIYNYTKENQMFIPPSFALDNPRLIVREGDTMRLDCNPKGFP
EPIIEWRRADGTPIIQGSWRDASVSGHVLNIPNVSRWHTGKYVCLANNGMQPPANQTTDV
EVNFSPYIRVPNNIVYVFNKTAQIECEIQAWPEPVLAWEYDDGTTVEGSHYKIEVAPTPD
PWRWIMKLEIPHINEHDMRQYICVAKNELNNTTVRGYIRLSHPGPKQQSQIQQQPREFGS
PPPTLTSYEELCSAQRCPSCPRCDRALMITPMNASLGNKPHRNTNCQLYAIGKPVYHKYK
EELFGAWLRDSNSSEAQREKLWTTQENDVERLHEFRSKASFKSDRVDEFHKLQKPFFGNG
HIVYSGSFFYQANESGTPGDIVRYDLTQSRIKSAHLPHAQGRLYTAQHNQVDFSADDNGL
WAIYSIEGSNNTAVAKLSFDPNKDDLNIDYIWNISLNHKQVGEMFIVCGVLYALDSATER
DSKVSIAIDLYLSKSIDVTLQFTNPFRKTTQLGYDHTHKELYSWDRGNQLTYPVRYNELP
GP