New model in OGS2.0 | DPOGS204648  |
---|---|
Genomic Position | scaffold266:+ 105952-113312 |
See gene structure | |
CDS Length | 1545 |
Paired RNAseq reads   | 15 |
Single RNAseq reads   | 40 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001974 (4e-60) |
Best Drosophila hit   | ionotropic receptor 75d, isoform A (1e-51) |
Best Human hit | glutamate receptor delta-1 subunit precursor (1e-09) |
Best NR hit (blastp)   | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (2e-88) |
Best NR hit (blastx)   | PREDICTED: similar to ionotropic glutamate receptor-invertebrate [Tribolium castaneum] (5e-84) |
GeneOntology terms    | GO:0005234 extracellular-glutamate-gated ion channel activity GO:0016020 membrane GO:0004970 ionotropic glutamate receptor activity |
InterPro families   | IPR001320 Ionotropic glutamate receptor |
Orthology group | MCL20851 |
Nucleotide sequence:
ATGAATACCTATACCTGCTCCGAGGTGTCGGGGACGGGGAGGACGCCGGCTCCCCTGGAC
CGACCCAGCAGCGAACACACAGACAGACAAGCTCCGTCTGCTCGCTGGAGCTCCCTCACA
GCGTATAAGATTGCAGAGTATTCAGAAGTTATTTTAAGCCTGAGAGCCGTCTGGCGGCCT
GCCAGATATGATTTTAAAAACTCGACTCTCGTAGAAATCGTCAAACAAAATAAAATAGTA
AAGTCTGTGTACGGTGTTATGGAGGATTATAGAGGTGTCAGAATGTTGCCAGTATCAGCG
AGACGCAGGGATTTGAGGAAGCACAATCTGACTATGGCCAACGTCATCACAGATAGCAAT
GAGACCAGACAGCACCTCGACGATAGGCTAAACCTGCACCAGGATTCCATAACCAAGATG
TCGTATGTCGTGGCGAAGATCTGCTTCGATATGCTGAACGCTACCGAGAACAGAATCTTC
ACGCACACTTGGGGCTACAAGGACAAAAACGGCAACTGGCAGGGCATCATCGACCATCTG
CTCAAGAAGAAGGCGGATCTTGGTACCCTGACTATATTTACCCAGGAGCGCATGAAGGCC
ATAGACTACATAGCCATGGTAGGTTCTACCGCGGTCCGGTTCGTGTTCAGGGAGCCCCCG
CTGGCTCTATTGGAGAATATCTTCACCTTGCCATTCACATCGGCTGTATGGATAGCGATC
GGCATCTGCGTGCTTGGTTGTGCTGTATTCTTATACATAACATCTAAATGGGAAGCCACG
GTGGGAATGCATCCGTTACAGCTAAGCGGTTCATGGGCGGATGTGTTGATACTGATCATA
GGAGCCGTCCTTCAACAAGGATGTACGCTTGAACCAAGATACGCCGCTGGTCGATGTGTG
ACCTTACTGTTGTTCGTGTCTCTCACCGTGTTGTTCGCGGCGTACTCCGCCAATATCGTG
GTGCTGCTCCGAGCCCCCAGCAGCTCTGTGCGCTCGCTGCCCGACTTACTGAACTCACCG
CTGAAGCTTGGTGCCAGCGACTTTGAATACAACCGGTATTTCTTTAAGAAACTCAACGAT
CCCATACGCAAGGCAATTTATAGCAAGAAAATAGCTCCGTCAGGCAAGAAGCCAAACTTC
TACAGCATGAAGGAGGGAGTCGAGAAGATAAGGAAGGGATTATTCGCTTTCCACATGGAA
CTTAACCCCGGATATCGCTTAATCCAGGAGACTTATCAGGAAGAGGAGAAATGTGATTTG
GTTGAGATCGATTACATAAATGAAATTGATCCCTGGCTGCCCGGACAGAAGCGATCGCCT
TACAAGGATTTGTTTAAAATAAGCTTCATCAAGATTCGTGAGTCGGGCGTGCAGTCGTGT
GTGCACCGCCGGCTGCACGTGGGTCGGCCGCGCTGCTCCGGCAGCGTGTCCACCTTCAGC
AGCGTGGGCATCACGGACATGTACCCCGCGCTGCAAGCCACGCTCTACGGCGCTGTCATG
TCCGTAGCCGTGCTCATGATGGAAAAAGTTCACTACAAACTGTAA
Protein sequence:
MNTYTCSEVSGTGRTPAPLDRPSSEHTDRQAPSARWSSLTAYKIAEYSEVILSLRAVWRP
ARYDFKNSTLVEIVKQNKIVKSVYGVMEDYRGVRMLPVSARRRDLRKHNLTMANVITDSN
ETRQHLDDRLNLHQDSITKMSYVVAKICFDMLNATENRIFTHTWGYKDKNGNWQGIIDHL
LKKKADLGTLTIFTQERMKAIDYIAMVGSTAVRFVFREPPLALLENIFTLPFTSAVWIAI
GICVLGCAVFLYITSKWEATVGMHPLQLSGSWADVLILIIGAVLQQGCTLEPRYAAGRCV
TLLLFVSLTVLFAAYSANIVVLLRAPSSSVRSLPDLLNSPLKLGASDFEYNRYFFKKLND
PIRKAIYSKKIAPSGKKPNFYSMKEGVEKIRKGLFAFHMELNPGYRLIQETYQEEEKCDL
VEIDYINEIDPWLPGQKRSPYKDLFKISFIKIRESGVQSCVHRRLHVGRPRCSGSVSTFS
SVGITDMYPALQATLYGAVMSVAVLMMEKVHYKL