| New model in OGS2.0 | DPOGS211529 |
|---|---|
| Genomic Position | scaffold3452:+ 27327-28934 |
| See gene structure | |
| CDS Length | 1608 |
| Paired RNAseq reads | 299 |
| Single RNAseq reads | 834 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003841 (5e-153) |
| Best Drosophila hit | ankyrin, isoform F (8e-16) |
| Best Human hit | BRCA1-associated RING domain protein 1 (2e-35) |
| Best NR hit (blastp) | BRCA1-associated RING domain protein, putative [Pediculus humanus corporis] (4e-56) |
| Best NR hit (blastx) | BRCA1-associated RING domain protein, putative [Pediculus humanus corporis] (1e-60) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0006281 DNA repair GO:0006974 response to DNA damage stimulus GO:0046872 metal ion binding GO:0016874 ligase activity GO:0003723 RNA binding GO:0008270 zinc ion binding GO:0005622 intracellular GO:0005515 protein binding GO:0043065 positive regulation of apoptosis GO:0005634 nucleus |
| InterPro families | IPR002110 Ankyrin repeat IPR001357 BRCT IPR013083 Zinc finger, RING/FYVE/PHD-type IPR020683 Ankyrin repeat-containing domain |
| Orthology group | MCL18533 |
Nucleotide sequence:
ATGTCCAATGAAAAGCTCAATAGGTTCCTCAAAGCATTGGATGCTGTCCAAAGTGACTAC
ACCTGCGGAGTTTGTTCAGAACTATGCAAGAGACCTATTACTTTGAGTACGTGTTTTCAT
ATTATATGTGCGGTACACTTCGAAAATTTACACAGATGTCCCACATGCGATATACCGATT
ACGGGATGCACAACATTTACAGATGACCGTTTAGAGAGTTGTATAGAGTCAGCAAGAGAG
TTAGGAAACATATTTGAGAGTTTCCGAGTGAAATCCGCCTTACAAGTATCGAATGCGGGG
AGTTCTAACGGTACGAACAAGAAGCGAGTTAAAAAGGCTGTAGGAGCGAGTGACAAAGAA
AACAAAAGTAACTCTAAGGCCTCTCATATATATACACCTGAGAAATCAGCGAAGTCGAAG
AAACAAGAGGGCAAAGGTGATAATGTGAACACTACATTACTGTCCACAGCGAGTTCGAAA
ATAAATGCGGGCATTGAAAAAAGAAATAACAAGGGAGAGACGGCTTTACATGTAGCTTGC
CGTCTGGGGAAGGTTGAATCTGCTATAGACTTATTAAAACAAGGCGCCAACCCGAATACT
AAGGACAACGCAGGATGGACTCCTTTACATGAAGCCGTTCAAAATGGCCGTCTCGATATA
GTTAGTGCTTTATTACAGTATAACACTCTGATTGATGTACCAGGCCAAGGAAACGAGACT
CCGTTACACGAAGCGGTGAGATATAATCACAGAGAAATAGCCGAAGAGTTGGTAAAGCAT
GGTGCAGATGTCAATTCTAGGAACTGCAAAGGGGAAACTCCATTGAATTTAGCAAGCAAT
GACATGAAGAAGATTTTAGAAGATGCCTCAGAAAATGTGATACAAACGCAGGGCGTCAAT
ATCAGTTACTTATCAGACTTGTATACGGAATTGGACTCCGAAGATATTCAGGTCTTCTGC
GTCTCTCAATTCCGTACAGTTCACAATAAACTGAAATCCCTATCGAGACATCATTCTAAT
TTGCATGTTGAGGCGAAATTTTCAAAAAAAGTTACTCACCTTTTGGTAGATGAGGATGAC
GGTGTCTGTACCTCAAGCTTGGATGTACTTCAGGGGATTGTGAGTTCCGTATGGATAATA
TCAGCCCAATGGATACTCAAGTCTACAGAAGAGAAATTGATGCCGTTCAAAAGTTATGAA
GTCATTGGGGTCGGTAACAAATCATATAACGGTCCGAGAAACTCTAGATACAACAAATAC
AAGCAACTGCCCGGTATTTTCAATGGCTGCCACATTTACTTGCACAACTTCAACACAAAG
TATGAGATATCCAAGACTATTGTACTAACAAAGGCCATTTTAACAAAATTAATCATGGAT
GCTGGTGGTGTAGTTCTGAGGAGAGTTCCGAATCCAGAATTGATTCCTGATGAAGAGAAG
GTGGTTCCGTATCACGCTAAGAAGGGCGGAAAGTTGGTTGAATGCTCCCATTTCATTATA
TTTAAGAACATGTACGAGCCGATGTATAATATGTCACATTTCAAAGCCCTGCCCATCGGC
TGGCTCATAGAGTGTATAGAAAAATATGAATTATGTGAGCCCTGGTGA
Protein sequence:
MSNEKLNRFLKALDAVQSDYTCGVCSELCKRPITLSTCFHIICAVHFENLHRCPTCDIPI
TGCTTFTDDRLESCIESARELGNIFESFRVKSALQVSNAGSSNGTNKKRVKKAVGASDKE
NKSNSKASHIYTPEKSAKSKKQEGKGDNVNTTLLSTASSKINAGIEKRNNKGETALHVAC
RLGKVESAIDLLKQGANPNTKDNAGWTPLHEAVQNGRLDIVSALLQYNTLIDVPGQGNET
PLHEAVRYNHREIAEELVKHGADVNSRNCKGETPLNLASNDMKKILEDASENVIQTQGVN
ISYLSDLYTELDSEDIQVFCVSQFRTVHNKLKSLSRHHSNLHVEAKFSKKVTHLLVDEDD
GVCTSSLDVLQGIVSSVWIISAQWILKSTEEKLMPFKSYEVIGVGNKSYNGPRNSRYNKY
KQLPGIFNGCHIYLHNFNTKYEISKTIVLTKAILTKLIMDAGGVVLRRVPNPELIPDEEK
VVPYHAKKGGKLVECSHFIIFKNMYEPMYNMSHFKALPIGWLIECIEKYELCEPW