New model in OGS2.0 | DPOGS209287  |
---|---|
Genomic Position | scaffold707:- 29514-37888 |
See gene structure | |
CDS Length | 1911 |
Paired RNAseq reads   | 33 |
Single RNAseq reads   | 82 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013723 (9e-96) |
Best Drosophila hit   | CG5038 (3e-34) |
Best Human hit | transmembrane and TPR repeat-containing protein 1 isoform 2 (7e-55) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC000396 [Tribolium castaneum] (3e-143) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC000396 [Tribolium castaneum] (2e-129) |
GeneOntology terms    | GO:0016021 integral to membrane GO:0016020 membrane GO:0005488 binding GO:0003674 molecular_function GO:0008150 biological_process GO:0005739 mitochondrion |
InterPro families    | IPR013618 Domain of unknown function DUF1736 IPR001440 Tetratricopeptide TPR-1 IPR019734 Tetratricopeptide repeat IPR011990 Tetratricopeptide-like helical IPR013026 Tetratricopeptide repeat-containing |
Orthology group | MCL12332 |
Nucleotide sequence:
ATGAATGTAAACAAAAACAATTTCATTTTTGTTTTTATCTGCGAGGTAGCGGGAGTGGTG
GGCCGAGCAGACGTGTTGGCTTGCGTATTCTTCTTGTCTTCTGTTCTTCTGTATCATGGA
TCTTCTAGTCGCAGGCGTGTGTGGTCAAGTGTTGTGTTAGCTGGTCTCAGCATGCTGGCC
AAAGAGACAGGACTGACTGCACTGCTGTTTAATTTAGTTTTTGATATTTATCGAAGTTGG
AGCTCAGTCACAAGGTCGCCATCGAAATTCCGTTGGCGGCACGACGGTCTGTGGAGCAGA
CTGAGCAAAGGTCTCATAGTCCTGATCATGTTAGCCATTGCTAGGCTCGCCTTGCTTCAA
GGATCCTTACCAGCTTTCTCGACGCAAGACAACCCACCGGCGTTTCATCCATCCTTCATT
GTCAGATTAATGACGTTCTGCTATTTAGCAGCCTTCAATTGGTGGCTGCTCCTGTGTCCT
TGGACTCTTAGTCACGACTGGCAGATGGGGTCGATACCTCTGATTACCAGCGGTTGGGAT
CCAAGGAATCTTATTACTGGGGCAGCCTTAGTAGCCCTAATGGCGCTGTCATATAGATTC
TTGATGGACTTGGAGCTTCAGAGACATACTCCTCTGGTAGTCGGATTGATGCTCCTTGTA
ATCCCATATCTACCAGCATCCAACCTACTGGTCACTGTAGGATTTGTTGTAGCTGAACGC
GTTCTGTATATACCAAGTGTAGGGTCAGTTCTTTTGACGGTATACGGTGTGCAAATATTG
TGTCATCGAGGTGGAAGGTGGCTGGCACTAGGACTGGCAATACTTGTAGCTGCTGGCGCT
GCGAGGACCTTCGATAGGAATAGAGACTGGAGGACGAGAGAGACACTGTTGAGGGCGGAT
CTAGCGGTTTTACCGCACAATGCAAAATTGCACTATAATTTTGCAAACTTCCTTAAAGAC
ATCGAGCAACAGGAGAACGCTATAAAACATTATAAAGAAGCGCTTAAACTGTGGCCAAGT
TACGCGAGTGCTCACAATAATTTAGGCACGTTGGTCCTGGCATCAGGACGAGCGGAGCAT
CATTTTCTACAAGCTCTTAAATACAATAAGGACCACGTGAATGCTCATTACAACCTGGCC
AAATTATACCGGAAAAAGAATCGCGTGTCTGAATCATTAAAGATGTTGGAACGCTGCATA
ACTCTGGAGCCGCGGTTCGTCCTGGCCTACATCGAACTTCTTCACATCACCCCCGAAAAC
GAGAAGAGACCCACACTAGAGAGATTGATTGAATTGGAACCGATGAATTGGGAACATTAC
TACCTGTATGGAAACTGGCTGAAGGGAAGAGGTCTTTGGCCTCTGTCTCTCTCGTACTAT
AAACGGTCTATCCGTGTGTCGTTGTTGTCTCGTGGAGCACTACCGCCGCTGAGGGCAGCA
TGCCTTCTGTTGAGGTCTGCTGGTCAACGAGTACGGCTTCTGCAGCTAACCACGAGCTGG
CACACCCTTGTGGGAGGTGAGGGGGCAGCCTCACGACGTCGGGCTGCGGCCGCGGCCTGG
AGACTCCGCAGTGAATTGGAAGGCCGAGCTGCTAGATACGCTAGGACTCCTGTAATGACG
TCCACTTGTTTGCATCACAGTCAACTCGAGGTGTCGCCGGAGACCATTAAACAAAACAGT
TTAGTGAAACACACGAGGACAATAACTGTATCCAGTGATTTAAATATAAACACAAGTTGC
CAAAAATTAGATAATAAAAAAAGCGTATCTATATCTGCTCAATATAAACCTATTCACAAT
AAATCTGAAGCCGGCCCTAAACAGAAGAGTTGCCCTCTACATAAGAAAAACAAAATCAAA
GAGCCGGATCCCCTGCCGTTTGTTAGCGATCATTTAATAAAAACATCCTAA
Protein sequence:
MNVNKNNFIFVFICEVAGVVGRADVLACVFFLSSVLLYHGSSSRRRVWSSVVLAGLSMLA
KETGLTALLFNLVFDIYRSWSSVTRSPSKFRWRHDGLWSRLSKGLIVLIMLAIARLALLQ
GSLPAFSTQDNPPAFHPSFIVRLMTFCYLAAFNWWLLLCPWTLSHDWQMGSIPLITSGWD
PRNLITGAALVALMALSYRFLMDLELQRHTPLVVGLMLLVIPYLPASNLLVTVGFVVAER
VLYIPSVGSVLLTVYGVQILCHRGGRWLALGLAILVAAGAARTFDRNRDWRTRETLLRAD
LAVLPHNAKLHYNFANFLKDIEQQENAIKHYKEALKLWPSYASAHNNLGTLVLASGRAEH
HFLQALKYNKDHVNAHYNLAKLYRKKNRVSESLKMLERCITLEPRFVLAYIELLHITPEN
EKRPTLERLIELEPMNWEHYYLYGNWLKGRGLWPLSLSYYKRSIRVSLLSRGALPPLRAA
CLLLRSAGQRVRLLQLTTSWHTLVGGEGAASRRRAAAAAWRLRSELEGRAARYARTPVMT
STCLHHSQLEVSPETIKQNSLVKHTRTITVSSDLNINTSCQKLDNKKSVSISAQYKPIHN
KSEAGPKQKSCPLHKKNKIKEPDPLPFVSDHLIKTS