New model in OGS2.0 | DPOGS212991  |
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Genomic Position | scaffold91:+ 46346-47621 |
See gene structure | |
CDS Length | 525 |
Paired RNAseq reads   | 268 |
Single RNAseq reads   | 804 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006905 (4e-50) |
Best Drosophila hit   | alpha-L-fucosidase, isoform B (2e-27) |
Best Human hit | tissue alpha-L-fucosidase precursor (4e-29) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP007285-PA [Tribolium castaneum] (7e-37) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC002989 [Tribolium castaneum] (6e-38) |
GeneOntology terms    | GO:0004560 alpha-L-fucosidase activity GO:0006027 glycosaminoglycan catabolic process GO:0005625 soluble fraction GO:0008152 metabolic process GO:0016798 hydrolase activity, acting on glycosyl bonds GO:0005529 sugar binding GO:0005737 cytoplasm GO:0005975 carbohydrate metabolic process GO:0006004 fucose metabolic process GO:0005764 lysosome |
InterPro families    | IPR000933 Glycoside hydrolase, family 29 IPR016286 Glycoside hydrolase, family 29, bacteria/metazoa/fungi IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR017853 Glycoside hydrolase, superfamily |
Orthology group | ND |
Nucleotide sequence:
ATGGCTATAGAAGATGTTCTTAGTATTGAGCATTTGTTGAAAGAAGTAGTGTCTACTGTC
AGCTGCGGAGGCAATGCTCTAATAAACGTCGGGCCAACGAAGGAAGGTACCATCGCTGCT
ATATTCCAAGAGCGATTGCTGGCTCTCGGCGACTGGTTGTCCTTGAACGGCGAAGCTATC
TACGGCAGCTCGCCGTGGCATTCCCAGAACGACACCAGGAACGGCGACGTCTGGTACACC
TGTGTCAAGAGCACCTTCAACGCCCGTCATCCGTCATCGAGGCCGAGGAGAGCTGATATG
ATAACAGCCATATACGCCGTTGTATTGAAATGGCCTGAAAACAACTTGCTGGTTATCAGT
GACATTGTTCAGGATCTACACTCCGGTACTTATGAGGTCACTATGATCGGCTCCGAGGGG
CACTTGAAGTGGAACATTGATAGTGGCCTCGTATATATAAGGCTTCCTGATAAGGCTACC
GTCAAATCAAACTACGCCTGGACGCTCAAATTTAAACCAAAATAA
Protein sequence:
MAIEDVLSIEHLLKEVVSTVSCGGNALINVGPTKEGTIAAIFQERLLALGDWLSLNGEAI
YGSSPWHSQNDTRNGDVWYTCVKSTFNARHPSSRPRRADMITAIYAVVLKWPENNLLVIS
DIVQDLHSGTYEVTMIGSEGHLKWNIDSGLVYIRLPDKATVKSNYAWTLKFKPK