| New model in OGS2.0 | DPOGS215771 |
|---|---|
| Genomic Position | scaffold75:- 157462-164285 |
| See gene structure | |
| CDS Length | 3111 |
| Paired RNAseq reads | 5508 |
| Single RNAseq reads | 11885 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003539 (0.0) |
| Best Drosophila hit | lethal (2) 35Df (0.0) |
| Best Human hit | superkiller viralicidic activity 2-like 2 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to lethal (2) 35Df CG4152-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to helicase [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0004004 ATP-dependent RNA helicase activity GO:0005524 ATP binding GO:0003676 nucleic acid binding GO:0071013 catalytic step 2 spliceosome GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR012961 DSH, C-terminal IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR001650 Helicase, C-terminal IPR014001 DEAD-like helicase IPR016438 RNA helicase, ATP-dependent, SK12/DOB1 |
| Orthology group | MCL13676 |
Nucleotide sequence:
ATGTCAGATATAAATAGTTTATTTGATTGCTTCGAAGAACCAGCTTTAAACGAAGCTGCC
ACCCAATTGCCAAATGTTAAAAGTGAAGAAGAAGCGCCTGTAACCAAGACGGAAGATGTT
AAAAAAGAAGAAACTATAGAAGCTTCGCCCAGTAATAAGCGTCCACATGAAGAAGTTAAG
TATGCAGATACTTCTAAGAAGCCCAGACAAGAAGAGGAAGACGACGCCGATATTATAAGC
GACATTAACCTCAACAATCTTGGTGCAAGGATACTTATACACACTCTTGATACACACGAA
GGCTGTACACATGAAGTGGCGATACCTCCCAATCAGGAATATGCTCAACTAATGCCAATT
ACTTCAGAACCAGCTAAGCAATACAGTTTTATCCTGGATCCGTTCCAAAAGGAAGCTATC
ATGTGCATTGACAACTTACAATCAGTACTTGTATCAGCACACACATCTGCCGGAAAGACT
GTTGTTGCAGAATATGCTATAGCTCTGTCACTAAAAAACAAACAAAGGGTTATTTACACA
ACACCCATCAAGGCTCTCTCTAATCAGAAATACAGGGAATTCTCTGAGGAGTTTCATGAT
GTGGGTCTGATTACTGGAGATGTTACTATCAATCCATCCGCTTCCTGTTTGATAATGACA
ACTGAGATTCTAAGAAATATGTTATATAGAGGTTCAGAGATAATGAGGGAAGTTGGTTGG
GTTGTGTTCGACGAGATTCATTACATGAGGGACAAGGAAAGAGGTGTTGTTTGGGAAGAA
ACACTTATCTTGCTACCCGACAATGTTCACTATGTATTTTTATCGGCTACTATACCCAAT
GCTCGTCAGTTTGCTGAGTGGGTGTGTCGACTTCACTCTCAGCCGTGTCATGTTATATAC
ACTGAATACAGACCCACACCCCTCCAGCATTATATATTCCCTGCTAGCGGAGACGGGATT
CATCTTGTTGTGGATGAAAAGGGTCAATTCAAAGAGGACAACTTCAATACAGCTATGACG
GTGTTGAGTAACGCGGGCGGGGCGTCGGCGGGGGGTGAGCGCGGCCGGAGGGGGGGACTC
AAGGGGGGGAGCAGTAGTATCTTTAATATAGTCAAAATGATCATGGAGAGAAACTTCGCA
CCGGTGATTATATTCAGTTTCAGTAAGAAAGACTGCGAGCTGTATGCTATGCAGATGGCT
AAATTGGATTTTAATACAATTGAAGAGAAAAAACTTGTAGACGAGGTTTTCAACAACGCG
ATGGACGTTCTATCTGAAGACGATCGTAAGTTACCGCAGGTTGAAAACGTGATACCCTTG
TTGAGGAGAGGCATCGGTATACATCACGGAGGACTGCTGCCCATACTGAAAGAAACCATA
GAAATATTGTTCGGCCTGGGGCTTATCAAGGCGCTGTTCGCCACCGAGACCTTCGCCATG
GGGCTCAACATGCCCGCTAGGACTGTTGTGTTCACAAATTGCCAGAAGTTTGACGGCAAG
GACTTCAGATTTATAACTTCCGGTGAATACATCCAGATGTCAGGTAGAGCTGGTCGTCGA
GGGTTGGACGATAAAGGTATCGTCATACTGATGATCGATCAGAAGGTTACTCCCAGTGTC
GTTAAGTCCATGGTACAGGGCAAAGCTGATCCTATAAATTCCGCCTTCCATCTTACATAC
AACATGGTCCTGAATTTATTAAGAGTTGAAGAGATAAACCCGGAGTACATGTTGGAGAGG
AGTTTTTATCAGTTCCAAAACCAAGCTGTTATCCCAGACCTCATCGACAAGGTGAAAGCT
AAGCAAAAGGAATATAGCGCGTTGTCAATAGAGGAGGAGCACTCTATAGCTTCATACTGT
AATATAAGGTCACAGTTGGAGCTGCTGGGGTCACAGTTCAGGTCGTTCATCACGAAGCCG
GAGTATATCAAGCCGTTCCTCCAGCCCGGTAGACTTGTTAAGGTGAAAACGGAAAAATAC
GAGTACGATTGGGGCATTATAGTGAACTTTAAACACAAAACCGGCAAAAGTAAGAAAGAC
GAGAACCCCCTGACCGCGGACACCGTCATAGTGGTGGACGTGTTGCTGCATGTTAAGAAA
TCAAAAGCCGACGAGGCCGACACGAACGTGCCTTGTCCTCCTGGAGAGACCGGCGACGTA
GAGGTGGTGCCGATCCTACACACGTTAATATATCAGATAAGTTCGCTGCGGGTGTACTAT
CCCAAAGACCTGCGACCGCCCGACAACAGGAAGTCGGTGCTGAAAACTATAGGGGAGGTC
AAGAAGCGGTTCCCGGAAGGACCGCCGCTACTGAATCCCATCAAGGACATGAAAATTGAG
GACTCTGTGTTCAAGGAATGCGTCGAGAGAATCAAGTTGTTAGAGGAAAGATTATACTCT
CACCCCCTCCACAACGACAAGAACCGTGGCGCCCTGACGGCGGCTTACGACGCCAAACAA
GAAATATACGAAGAGCTGACGTTAGCCAAGTCCGAGTTGAGGAGGGCGAAGAGCATCTTA
CAGATGGACGAACTGAAGAAGAGGAAGCGAGTGCTGAGGCGACTCGGGTACTGCACGCTG
TCAGACGTCATAGAGCTCAAGGGCAGGATAGCCTGCGAACTCAGCAGTGCGGACGAACTG
CTTCTGACCGAGTTGATCTTCAACGGTGTGTTTAACAATCTGTCCGCGGAGCAGAGCGCG
GCGCTAGTGAGCTGCTTCGTGTGTGACGAGAACAGCACTCAGACGTCCGCCACGGGCGAG
GAGCTGAGAGGCGTCCTGAGACAACTACAGGAATACGCGCGTAGAATAGCGAAAGTATCA
ATCGACGCGAAGATGGATCTCGACGAGGACGAGTACGTTGGAAAATTCAAATGTACCCTC
ATGGACGTAGTACTCGCGTGGGCGAAGGGCGCCTCCTTCCTACAGATATGCAAGATGACT
GACGTCTTTGAAGGTTCAATAATTCGTTGTATGCGTCGCCTGGAGGAGGTACTCCGGCAG
TTGTGTCAGGCCGCCAAGAACATCGGGAACACGGACTTGGAGAATAAGTTCAGCGACGCC
ATCAAAATGCTGAAGAGAGACATAGTGTTCGCGGCCAGCCTTTACATGTAG
Protein sequence:
MSDINSLFDCFEEPALNEAATQLPNVKSEEEAPVTKTEDVKKEETIEASPSNKRPHEEVK
YADTSKKPRQEEEDDADIISDINLNNLGARILIHTLDTHEGCTHEVAIPPNQEYAQLMPI
TSEPAKQYSFILDPFQKEAIMCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYT
TPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGW
VVFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVIY
TEYRPTPLQHYIFPASGDGIHLVVDEKGQFKEDNFNTAMTVLSNAGGASAGGERGRRGGL
KGGSSSIFNIVKMIMERNFAPVIIFSFSKKDCELYAMQMAKLDFNTIEEKKLVDEVFNNA
MDVLSEDDRKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATETFAM
GLNMPARTVVFTNCQKFDGKDFRFITSGEYIQMSGRAGRRGLDDKGIVILMIDQKVTPSV
VKSMVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFYQFQNQAVIPDLIDKVKA
KQKEYSALSIEEEHSIASYCNIRSQLELLGSQFRSFITKPEYIKPFLQPGRLVKVKTEKY
EYDWGIIVNFKHKTGKSKKDENPLTADTVIVVDVLLHVKKSKADEADTNVPCPPGETGDV
EVVPILHTLIYQISSLRVYYPKDLRPPDNRKSVLKTIGEVKKRFPEGPPLLNPIKDMKIE
DSVFKECVERIKLLEERLYSHPLHNDKNRGALTAAYDAKQEIYEELTLAKSELRRAKSIL
QMDELKKRKRVLRRLGYCTLSDVIELKGRIACELSSADELLLTELIFNGVFNNLSAEQSA
ALVSCFVCDENSTQTSATGEELRGVLRQLQEYARRIAKVSIDAKMDLDEDEYVGKFKCTL
MDVVLAWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSDA
IKMLKRDIVFAASLYM