| New model in OGS2.0 | DPOGS215772 |
|---|---|
| Genomic Position | scaffold75:- 58293-65931 |
| See gene structure | |
| CDS Length | 1536 |
| Paired RNAseq reads | 3710 |
| Single RNAseq reads | 9869 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003652 (0.0) |
| Best Drosophila hit | lamin (1e-102) |
| Best Human hit | prelamin-A/C isoform 2 (3e-47) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000015219 [Nasonia vitripennis] (6e-163) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000015219 [Nasonia vitripennis] (1e-129) |
| GeneOntology terms | GO:0005638 lamin filament GO:0007084 mitotic nuclear envelope reassembly GO:0007430 terminal branching, open tracheal system GO:0005515 protein binding GO:0005634 nucleus GO:0007097 nuclear migration GO:0005198 structural molecule activity GO:0035262 gonad morphogenesis GO:0048546 digestive tract morphogenesis GO:0001745 compound eye morphogenesis GO:0006998 nuclear envelope organization GO:0007417 central nervous system development GO:0040003 chitin-based cuticle development GO:0005635 nuclear envelope GO:0005811 lipid particle GO:0005875 microtubule associated complex GO:0005652 nuclear lamina GO:0006342 chromatin silencing |
| InterPro families | IPR016044 Filament IPR001322 Intermediate filament, C-terminal IPR001664 Intermediate filament protein |
| Orthology group | MCL10638 |
Nucleotide sequence:
ATGTATGAGCATGAATTACAAGATGCCAGAAAACTCTTAGATGATACCTCCAGAGAAAAA
GCCAAATTGGAGATAGATTTGAAGAGACTGTACGAGGAAAATGATGACCTGAAAAAGCGC
CTAGATAAGAAGACCAAGGATTGTCAGCAGGCTGAAAATTTGGCGCGTCACTATGAGACA
CGTTTCACCGAGGAGAGCAACAAATATAACACAGCACTCGCAGACAAGAAGAAGGCTCAA
GATGAGGCCAGGGATCTCGCCAAGGAGTTGGAGAAATTGCGGAAGGTGTACGCTGAAGCG
CGCAAGACCTTAGAAGATGAGATGCTGTGTCGCATTGATATGGAGAATACGGTGCAGAGC
CTCAGAGAGGAGCTGTCCTTCAAGGAACAGGTGTTCCAGCAGGAGATGCAGGAGACGCGC
ACCAGGAGACAGGTGGAGATCTCCGAGATCGACGGACGCCTGGCCCAGCAGTATGAGGCG
AAACTGCAGCAGAGTCTTCAGGAACTACGCGAGCAACAGGAAGCTAACATCAAGGCGAAT
CGTGATGAAATAGAGGCCTTATACGAGAACAAGTTGAAGAATCTACAATCGGCGGCTACT
CGTAACAACACAGCTGCGACCGTGGCCGTCGACGAGCTCAGGACCATGCGGACAAGGATC
GACTCGCTGAACAGTACCCTCAACGATCTGGAGAACAAGAACGCTGCTCTCAGCAACCGC
TGCCGCGAACTCGAACGCCAACTAGAATCCGAGCGAGCTCGTCACGCCGAGGACCTGGCG
TCCCTGGAACAAGAACTGGCGCGGCTGAGAGACGAGATGGCGTCCCAGCTCAGGGAGTAC
GCCACACTCATGGACATCAAGTGCTCGCTGGACCACGAGATCGCCACCTACCGCGCGCTC
AAGCTCCCGCTCCTCCTGTCCATGTTGAACCTCACGTCTCAGTCCCCCGGCCGTGAGTCC
CGTGCGTCCATGAGCGCCTCAGGTAGTGGTCGCGTCACACCAGGTCGGCGGGCGACTCCT
CTCCGCGCCGCTCGTAAGCGCACCTTGCTAGATGAAAGTGAAGAACGCAGCCTTCAAGAC
TTCAGCGTCACGTCCAGCGCTAAAGGAGACCTGGAGGTCGCAGAGGCCTGCCCAGAGGGA
GCGTTCGTCAAGATCCGCAATAAAGGAAAGAAGGAGCTGAGCTTGGGCGGATACCAGATC
CTTCGCAAGGCTGGTGACCAGGAGACTCTGTTCAAGTTCCACCGAACAGTGAAGTTGGAG
CCGGGCGCGGTTAGTACGGTGTGGTCGGCGGACGTGGGAGCCCATCACGACCCGCCCACC
AGCATCGTTATGAAGGAACAGAAGTGGTTCGTGGCCGACTCGTTCGTTACATCGTTACTT
AATAATGATGGAGAAGAGGTAGCGGTGTCCGAGAGACAACGACGACAGATAAGTACAAGT
GCGCAGCGACACCGGGAACTAGCACACAAGTTCCCACGTCGCGAACAGCAACTGGGCGAA
ATTCGTGAAGGTGAAGAGAATTGTCGTATTATGTAA
Protein sequence:
MYEHELQDARKLLDDTSREKAKLEIDLKRLYEENDDLKKRLDKKTKDCQQAENLARHYET
RFTEESNKYNTALADKKKAQDEARDLAKELEKLRKVYAEARKTLEDEMLCRIDMENTVQS
LREELSFKEQVFQQEMQETRTRRQVEISEIDGRLAQQYEAKLQQSLQELREQQEANIKAN
RDEIEALYENKLKNLQSAATRNNTAATVAVDELRTMRTRIDSLNSTLNDLENKNAALSNR
CRELERQLESERARHAEDLASLEQELARLRDEMASQLREYATLMDIKCSLDHEIATYRAL
KLPLLLSMLNLTSQSPGRESRASMSASGSGRVTPGRRATPLRAARKRTLLDESEERSLQD
FSVTSSAKGDLEVAEACPEGAFVKIRNKGKKELSLGGYQILRKAGDQETLFKFHRTVKLE
PGAVSTVWSADVGAHHDPPTSIVMKEQKWFVADSFVTSLLNNDGEEVAVSERQRRQISTS
AQRHRELAHKFPRREQQLGEIREGEENCRIM